RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ZNF107Q9UII5 783 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-206ENST00000397163 EML5Q05BV3 1969 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 ATG2BQ96BY7 2078 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 TERTO14746 1132 aaKnown RBP8.22□□□□□ -1.09
CAPN3-206ENST00000397163 PPIHO43447 177 aaKnown RBP8.22□□□□□ -1.09
CAPN3-206ENST00000397163 SLC16A7O60669 478 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 APODP05090 189 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 SERPINA5P05154 406 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 ACKR3P25106 362 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 GDI1P31150 447 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 BTG2P78543 158 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 SLC22A6Q4U2R8 563 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 TMEM240Q5SV17 173 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 C10orf91Q5T1B1 145 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 KCTD18Q6PI47 426 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-206ENST00000397163 MED25Q71SY5 747 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 ZDHHC22Q8N966 263 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 BHLHE23Q8NDY6 225 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 NUDCD2Q8WVJ2 157 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 SLC25A36Q96CQ1 311 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 WDR92Q96MX6 357 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 OR10A5Q9H207 317 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 PRTFDC1Q9NRG1 225 aa8.22□□□□□ -1.09
CAPN3-206ENST00000397163 MPDZO75970 2070 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 MUC22E2RYF6 1773 aaPredicted RBP8.21□□□□□ -1.09
CAPN3-206ENST00000397163 A0A0A6YYH2 397 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 A0A0J9YY10 115 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 MEGF11A6BM72 1044 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 A6NJ64 397 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 H7C1Q1 480 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 SCDO00767 359 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 PLRG1O43660 514 aaKnown RBP8.21□□□□□ -1.09
CAPN3-206ENST00000397163 IL2RAP01589 272 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 HEXAP06865 529 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 CD79AP11912 226 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 G0S2P27469 103 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 HRH1P35367 487 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 ARRB1P49407 418 aaPredicted RBP8.21□□□□□ -1.09
CAPN3-206ENST00000397163 PPP1CAP62136 330 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 PJVKQ0ZLH3 352 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 CHAF1BQ13112 559 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 ALG11Q2TAA5 492 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF585AQ6P3V2 769 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 CLEC9AQ6UXN8 241 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 PARGQ86W56 976 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF561Q8N587 486 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 SLC30A7Q8NEW0 376 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 FAM46BQ96A09 425 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 PRR13Q9NZ81 148 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 TREM2Q9NZC2 230 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 HHLA2Q9UM44 414 aa8.21□□□□□ -1.09
CAPN3-206ENST00000397163 CACNA1IQ9P0X4 2223 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 TEX13DA0A0J9YY54 714 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-206ENST00000397163 A0A1B0GV50 99 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 A0A1W2PPE2 198 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 NUDT19A8MXV4 375 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 F8VVB4 439 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 F8VWA3 439 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 RNH1P13489 461 aaKnown RBP8.21□□□□□ -1.1
CAPN3-206ENST00000397163 ITGA3P26006 1051 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 USF2Q15853 346 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-206ENST00000397163 MST1LQ2TV78 715 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 AWAT1Q58HT5 328 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 TANGO2Q6ICL3 276 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 DHRS11Q6UWP2 260 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 SPRED2Q7Z698 418 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 MARCH3Q86UD3 253 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 OOSP2Q86WS3 158 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 SULT4A1Q9BR01 284 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 NRSN2Q9GZP1 204 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 RNF122Q9H9V4 155 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 UBQLN4Q9NRR5 601 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 SLC2A8Q9NY64 477 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 PISDQ9UG56 409 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 MRPS33Q9Y291 106 aaKnown RBP8.21□□□□□ -1.1
CAPN3-206ENST00000397163 EMC9Q9Y3B6 208 aa8.21□□□□□ -1.1
CAPN3-206ENST00000397163 RNASEK-C17orf49H0YIS7 233 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 STMND1H3BQB6 276 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ZNF264O43296 627 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 SLC34A2O95436 690 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 IGHV2-5P01817 119 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 NR2C1P13056 603 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 AGAP20933 346 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 MAOAP21397 527 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 GPR3P46089 330 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 HTR5AP47898 357 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 HGFACQ04756 655 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 NFATC4Q14934 902 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 FAM76BQ5HYJ3 339 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 TEX30Q5JUR7 227 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 C1QL3Q5VWW1 255 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 C15orf54Q8N8G6 183 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 OR4D6Q8NGJ1 314 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 MRGPRFQ96AM1 343 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 KLHDC3Q9BQ90 382 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ABHD6Q9BV23 337 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 FAM60AQ9NP50 221 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 TMEM100Q9NV29 134 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 GDF2Q9UK05 429 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 LRP12Q9Y561 859 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms