RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CYYR1Q96J86 154 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 NECAB3Q96P71 396 aaPredicted RBP21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 SULT4A1Q9BR01 284 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 NMES1Q9C002 83 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 HCRTR2O43614 444 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 ZNF14P17017 642 aaPredicted RBP21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 LPAR6P43657 344 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 SKP2Q13309 424 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 FAHD2BQ6P2I3 314 aaPredicted RBP21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 TRAPPC6BQ86SZ2 158 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 ADAMTS17Q8TE56 1095 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 FAHD2AQ96GK7 314 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 NXF5Q9H1B4 397 aaKnown RBP21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 DZANK1Q9NVP4 752 aa21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 ASCC3Q8N3C0 2202 aaKnown RBP21.47■■□□□ 1.03
CSNK1E-203ENST00000396832 MED12Q93074 2177 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 DBX1A6NMT0 343 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 SCDO00767 359 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 XKRYO14609 159 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 MBTPS2O43462 519 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 CD5P06127 495 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 TGIF1Q15583 401 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 SGCAQ16586 387 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 DHRS11Q6UWP2 260 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 OTOSQ8NHW6 89 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 ASB5Q8WWX0 329 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 LOC101059948A0A1B0GTJ6 334 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 PMS2P1A4D2B8 440 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 HGFACQ04756 655 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 SLC17A1Q14916 467 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 BHLHE23Q8NDY6 225 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 RNF128Q8TEB7 428 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 AKR1E2Q96JD6 320 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 RSRP1Q9BUV0 290 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 NUDT9Q9BW91 350 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 CLDN16Q9Y5I7 305 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 WIF1Q9Y5W5 379 aa21.46■■□□□ 1.03
CSNK1E-203ENST00000396832 MT-ND4LP03901 98 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 EEF1A1P5Q5VTE0 462 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 TMEM184AQ6ZMB5 413 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 METTL21AQ8WXB1 218 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 SLC25A44Q96H78 314 aaPredicted RBP21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 PAPOLGQ9BWT3 736 aaKnown RBP21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 C17orf105B2RV13 164 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 LRP3O75074 770 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 CLN5O75503 358 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 MED6O75586 246 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 FOSL1P15407 271 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 HRH1P35367 487 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 CX3CR1P49238 355 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 CYCSP99999 105 aaKnown RBP21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 HHEXQ03014 270 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 ARMC6Q6NXE6 501 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 FDX2Q6P4F2 183 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 PRSS58Q8IYP2 241 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 SLC22A18ASQ8N1D0 253 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 CACFD1Q9UGQ2 172 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 BRWD1Q9NSI6 2320 aa21.45■■□□□ 1.02
CSNK1E-203ENST00000396832 WIPF3A6NGB9 483 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 MFNGO00587 321 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 LDLRAD4O15165 306 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 SERPINA5P05154 406 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 HNRNPA2B1P22626 353 aaKnown RBP21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 CD1CP29017 333 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 SLC6A9P48067 706 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 TMEM244Q5VVB8 128 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 FBXO46Q6PJ61 603 aaPredicted RBP21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 LINC00346Q8IVM7 164 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 AQP3Q92482 292 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 OR8B4Q96RC9 309 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 FN3KRPQ9HA64 309 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 ASH2LQ9UBL3 628 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 EMC9Q9Y3B6 208 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 A0A0A6YYH2 397 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 A6NJ64 397 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 HSPB2A8KAH6 182 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 SOX1O00570 391 aaPredicted RBP21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 ZNF264O43296 627 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 UTS2O95399 124 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 CD2P06729 351 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 FCGR3AP08637 254 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 NQO2P16083 231 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 CTLA4P16410 223 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 HSPB2Q16082 182 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 OR5AC2Q9NZP5 309 aa21.44■■□□□ 1.02
CSNK1E-203ENST00000396832 PHYHO14832 338 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 PRF1P14222 555 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 NME2P22392 152 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 MPZP25189 248 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 ISOC2Q96AB3 205 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 KIRREL1Q96J84 757 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 CDC6Q99741 560 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 MRPL22Q9NWU5 206 aaKnown RBP21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 LINC01565O15544 149 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 PNMTP11086 282 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 KRBOX4Q5JUW0 171 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 PHF19Q5T6S3 580 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 CHST4Q8NCG5 386 aa21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 ATXN7L1Q9ULK2 861 aaPredicted RBP21.43■■□□□ 1.02
CSNK1E-203ENST00000396832 A6NLC8 198 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms