RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 INPP5EQ9NRR6 644 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 ERGIC3Q9Y282 383 aa8.87□□□□□ -0.99
NEDD8-202ENST00000396828 EXOSC1Q9Y3B2 195 aaKnown RBP8.87□□□□□ -0.99
NEDD8-202ENST00000396828 PKD1L1Q8TDX9 2849 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 WNT9BO14905 357 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 MYL12BO14950 172 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 DHHO43323 396 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 SELENOFO60613 162 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 APOL3O95236 402 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 MT-ND2P03891 347 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 OR2T7P0C7T2 308 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 SMIM18P0DKX4 95 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 HOXB1P14653 301 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-202ENST00000396828 COL8A2P25067 703 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 C21orf33P30042 268 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-202ENST00000396828 NAA10P41227 235 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-202ENST00000396828 CAPZA2P47755 286 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF133P52736 654 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-202ENST00000396828 SH3BGRP55822 239 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-202ENST00000396828 HSF2Q03933 536 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 ELFN2Q5R3F8 820 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 C10orf128Q5T292 105 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 RNLSQ5VYX0 342 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 LRFN4Q6PJG9 635 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 SHFQ7M4L6 423 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 ERI1Q8IV48 349 aaKnown RBP8.86□□□□□ -0.99
NEDD8-202ENST00000396828 SLC35F2Q8IXU6 374 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 SPARTQ8N0X7 666 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 ACBD7Q8N6N7 88 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF511Q8NB15 262 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 OR10H4Q8NGA5 316 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 OR2T27Q8NH04 317 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 FGFBP3Q8TAT2 258 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 UBASH3BQ8TF42 649 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 ZNRF4Q8WWF5 429 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 SGCDQ92629 289 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 FCGR1BQ92637 280 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 MND1Q9BWT6 205 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 CDADC1Q9BWV3 514 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 JAM3Q9BX67 310 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 YIPF3Q9GZM5 350 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 MARCH7Q9H992 704 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 MYOZ1Q9NP98 299 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-202ENST00000396828 MYEF2Q9P2K5 600 aaKnown RBP8.86□□□□□ -0.99
NEDD8-202ENST00000396828 FZR1Q9UM11 496 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 TMEM14AQ9Y6G1 99 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 MEGF8Q7Z7M0 2845 aa8.86□□□□□ -0.99
NEDD8-202ENST00000396828 TVP23AA6NH52 213 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 C12orf71A8MTZ7 269 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF99A8MXY4 864 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF670-ZNF695F2Z2N8 137 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF593O00488 134 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-202ENST00000396828 PHYHO14832 338 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 IGHA1P01876 353 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 HPXP02790 462 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 HTR1AP08908 422 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 PATE4P0C8F1 98 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 CD79AP11912 226 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF35P13682 527 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 B4GALT1P15291 398 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF14P17017 642 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-202ENST00000396828 NR4A1P22736 598 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 APEX1P27695 318 aaKnown RBP8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ARR3P36575 388 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ENTPD1P49961 510 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ACTA2P62736 377 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ACTG2P63267 376 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 EMX1Q04741 257 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-202ENST00000396828 DBPQ10586 325 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-202ENST00000396828 TBCEQ15813 527 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-202ENST00000396828 TMPRSS11AQ6ZMR5 421 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 KCTD8Q6ZWB6 473 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF584Q8IVC4 421 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 TIGD4Q8IY51 512 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF454Q8N9F8 522 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 SLC26A10Q8NG04 563 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 OR6N2Q8NGY6 317 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 NEU4Q8WWR8 484 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-202ENST00000396828 RORBQ92753 470 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 SIGLEC11Q96RL6 698 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 WDR76Q9H967 626 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 ERVK13-1Q9NX77 482 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 KCNG2Q9UJ96 466 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 LAMP5Q9UJQ1 280 aa8.85□□□□□ -0.99
NEDD8-202ENST00000396828 IGKV1D-43A0A0B4J1Z2 117 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 TRIM64CA6NLI5 447 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 J3QRE1 110 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 GPANK1O95872 356 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 TFP02787 698 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 SPARCP09486 303 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 GAAP10253 952 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 MSR1P21757 451 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 PAX7P23759 505 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 ALDH3B1P43353 468 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 RPL5P46777 297 aaKnown RBP8.84□□□□□ -0.99
NEDD8-202ENST00000396828 ETV1P50549 477 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 LSM6P62312 80 aaKnown RBP8.84□□□□□ -0.99
NEDD8-202ENST00000396828 BLMHQ13867 455 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 GALEQ14376 348 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms