RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ARR3P36575 388 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 LIM2P55344 173 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 GPR85P60893 370 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 FAM26DQ5JW98 314 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 TMEM64Q6YI46 380 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 BAP18Q8IXM2 172 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 LRRC3CA6NJW4 275 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF207O43670 478 aaKnown RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 MMP7P09237 267 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 RPS23P62266 143 aaKnown RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 SNRPNP63162 240 aaKnown RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 OTUD1Q5VV17 481 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 CMBLQ96DG6 245 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 SLAMF6Q96DU3 332 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 TBXA2RP21731 343 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 AKR1C3P42330 323 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 PCBP4P57723 403 aaKnown RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 VWA1Q6PCB0 445 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 LINC00696Q6ZRV3 163 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 OR51E1Q8TCB6 317 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ZC3HAV1LQ96H79 300 aaKnown RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 JAM3Q9BX67 310 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ATP13A2Q9NQ11 1180 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ACER3Q9NUN7 267 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 GPR31O00270 319 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 GLI4P10075 376 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 EVX1P49640 407 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 LAIR1Q6GTX8 287 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 SLC16A11Q8NCK7 471 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 COMMD5Q9GZQ3 224 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 ZC3H12DA2A288 527 aaKnown RBP12.74□□□□□ -0.37
COL4A3-202ENST00000396578 HSBP1O75506 76 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 BCL6P41182 706 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 OR2B11Q5JQS5 317 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 TEX261Q6UWH6 196 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 U3KQ87 197 aa12.74□□□□□ -0.37
COL4A3-202ENST00000396578 GUSBP08236 651 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 SFTA3P0C7M3 94 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CCKARP32238 428 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 RELL2Q8NC24 303 aaPredicted RBP12.73□□□□□ -0.37
COL4A3-202ENST00000396578 OR1J1Q8NGS3 322 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 LYRM7Q5U5X0 104 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 SMIM14Q96QK8 99 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CMC2Q9NRP2 79 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 RNF186Q9NXI6 227 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CCDC187A0A096LP49 1063 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 SDCBPO00560 298 aaPredicted RBP12.73□□□□□ -0.37
COL4A3-202ENST00000396578 EDN1P05305 212 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF750Q32MQ0 723 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 RBM45Q8IUH3 476 aaKnown RBP12.73□□□□□ -0.37
COL4A3-202ENST00000396578 GALNT16Q8N428 558 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 OR2A1Q8NGT9 310 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 TECTBQ96PL2 329 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CRLF2Q9HC73 371 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 ZNF835Q9Y2P0 537 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 IFITM5A6NNB3 132 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 PLPP1O14494 284 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 PIAS2O75928 621 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 ETFRF1Q6IPR1 90 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 ABHD17CQ6PCB6 329 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CYHR1Q6ZMK1 362 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 VRK3Q8IV63 474 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 OR10AD1Q8NGE0 317 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 DUSP22Q9NRW4 184 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CLEC18AA5D8T8 446 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 KCNJ3P48549 501 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CNN1P51911 297 aaKnown RBP12.73□□□□□ -0.37
COL4A3-202ENST00000396578 HIST1H3AP68431 136 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 COTL1Q14019 142 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 DUSP5Q16690 384 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CTU2Q2VPK5 515 aaKnown RBP12.73□□□□□ -0.37
COL4A3-202ENST00000396578 FUNDC1Q8IVP5 155 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CLEC18CQ8NCF0 446 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CDCP1Q9H5V8 836 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 ASIC5Q9NY37 505 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 MRPS2Q9Y399 296 aaKnown RBP12.73□□□□□ -0.37
COL4A3-202ENST00000396578 LTBP3Q9NS15 1303 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CSNK1G2P78368 415 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CEBPEQ15744 281 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 DHRS11Q6UWP2 260 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 CMTM4Q8IZR5 234 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 SYT11Q9BT88 431 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 SLC5A6Q9Y289 635 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 TJP1Q07157 1748 aa12.73□□□□□ -0.37
COL4A3-202ENST00000396578 UBE2L5PA0A1B0GUS4 154 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 A0A1B0GX78 115 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 QDPRP09417 244 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 FABP4P15090 132 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 ARRB2P32121 409 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 FAM71E1Q6IPT2 247 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 NOL4LQ96MY1 436 aaPredicted RBP12.72□□□□□ -0.37
COL4A3-202ENST00000396578 MMP26Q9NRE1 261 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 GDF2Q9UK05 429 aaPredicted RBP12.72□□□□□ -0.37
COL4A3-202ENST00000396578 SULT1A3P0DMM9 295 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 SULT1A4P0DMN0 295 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 FAAP20Q6NZ36 180 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 AKR7LQ8NHP1 331 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 LKAAEAR1Q8TD35 194 aa12.72□□□□□ -0.37
COL4A3-202ENST00000396578 MRPS24Q96EL2 167 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms