RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 DHRS4L2Q6PKH6 230 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 SLC25A47Q6Q0C1 308 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 ARL9Q6T311 187 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 FBXW12Q6X9E4 464 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 OR5AS1Q8N127 324 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 C10orf53Q8N6V4 93 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 Q8N7P7 452 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 VPS33AQ96AX1 596 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 SPDL1Q96EA4 605 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 ITCHQ96J02 903 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 DMRTB1Q96MA1 342 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 SH3GL1Q99961 368 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 DCLRE1BQ9H816 532 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 SPAG4Q9NPE6 437 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 INPP5EQ9NRR6 644 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 NDRG4Q9ULP0 352 aaKnown RBP11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 FAM20BO75063 409 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 BMP2P12643 396 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 ETS2P15036 469 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 SAA4P35542 130 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 UGT2B15P54855 530 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 CD83Q01151 205 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 PRB3Q04118 309 aaPredicted RBP11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 HABP2Q14520 560 aaPredicted RBP11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 SGCAQ16586 387 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 FUNDC1Q8IVP5 155 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 DEFB107AQ8IZN7 70 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 PNKDQ8N490 385 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 CELF2-AS1Q8N7Q2 184 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 C17orf50Q8WW18 174 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 HDAC2Q92769 488 aaKnown RBP11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 ERGIC1Q969X5 290 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 UTP4Q969X6 686 aaKnown RBP11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 CLPTM1LQ96KA5 538 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 RAD21L1Q9H4I0 556 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 TPT1P8Q9HAU6 139 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 ZNF229Q9UJW7 825 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 LSM4Q9Y4Z0 139 aaKnown RBP11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 HECTD4Q9Y4D8 3996 aa11.11□□□□□ -0.63
VCPKMT-201ENST00000395859 ANKRD65E5RJM6 399 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 LGALS8O00214 317 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 MRASO14807 208 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 ADAM20O43506 726 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 FKBP6O75344 327 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 CH25HO95992 272 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 LHBP01229 141 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 THY1P04216 161 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 ZNF26P17031 533 aaPredicted RBP11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 DLX1P56177 255 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 ACTR3P61158 418 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 TRAP1Q12931 704 aaKnown RBP11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 LY6EQ16553 131 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 AANATQ16613 207 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 DMRTC1Q5HYR2 192 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 OR2T2Q6IF00 324 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 C8orf82Q6P1X6 216 aaPredicted RBP11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 SYT9Q86SS6 491 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 FGFRL1Q8N441 504 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 BBS10Q8TAM1 723 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 PIFOQ8TCI5 191 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 MAL2Q969L2 176 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 RCN3Q96D15 328 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 SSX3Q99909 188 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 THTPAQ9BU02 230 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 ZNF426Q9BUY5 554 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 NPFFR1Q9GZQ6 430 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 TMEM27Q9HBJ8 222 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 RAB18Q9NP72 206 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 NANSQ9NR45 359 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 SIRT7Q9NRC8 400 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 KAAG1Q9UBP8 84 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 DNAH10Q8IVF4 4471 aa11.1□□□□□ -0.63
VCPKMT-201ENST00000395859 MEIOCA2RUB1 952 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 IQCF6A8MYZ5 107 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 J3QW42 95 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 DVL1O14640 695 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 NDUFA2O43678 99 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 ANGPTL7O43827 346 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 PTBP3O95758 552 aaKnown RBP11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 SCG5P05408 212 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 TSPAN19P0C672 248 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 FAHP16930 419 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 CD200P41217 278 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 PCBD1P61457 104 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 KLRD1Q13241 179 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 MPPED2Q15777 294 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 SNCBQ16143 134 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 GTDC1Q4AE62 458 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 LCE2DQ5TA82 110 aaPredicted RBP11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 C10orf111Q8N326 155 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 DTX3Q8N9I9 347 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 SLC7A13Q8TCU3 470 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 STMN2Q93045 179 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 COG8Q96MW5 612 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 DDOQ99489 341 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 MEGF9Q9H1U4 602 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 ABCD2Q9UBJ2 740 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 GMEB1Q9Y692 573 aa11.09□□□□□ -0.63
VCPKMT-201ENST00000395859 A0A1W2PRD5 423 aa11.08□□□□□ -0.64
VCPKMT-201ENST00000395859 A0A1W2PRF3 423 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms