RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 B3GALNT1O75752 331 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 FSTP19883 344 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 MPGP29372 298 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 CXADRP78310 365 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 GK2Q14410 553 aaPredicted RBP11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 H1FNTQ75WM6 255 aaPredicted RBP11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 DTX1Q86Y01 620 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 TMEM229BQ8NBD8 167 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 OR51E1Q8TCB6 317 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 CASTOR1Q8WTX7 329 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 SLAMF6Q96DU3 332 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 NECAB3Q96P71 396 aaPredicted RBP11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 IER2Q9BTL4 223 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 SEC61A2Q9H9S3 476 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 B3GAT1Q9P2W7 334 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 SDK2Q58EX2 2172 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 TEX51A0A1B0GUA7 166 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 OR14I1A6ND48 311 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 OR2AT4A6NND4 320 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 HLA-AP01891 365 aaKnown RBP11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 CD96P40200 585 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 ATP1B3P54709 279 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 ACTBP60709 375 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 ACTG1P63261 375 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 PPP1R1AQ13522 171 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF813Q6ZN06 617 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF248Q8NDW4 579 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 TMEM104Q8NE00 496 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 SCARB1Q8WTV0 552 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 WDR77Q9BQA1 342 aaPredicted RBP11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 CRB3Q9BUF7 120 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 PLEKHA6Q9Y2H5 1048 aa11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 NOP16Q9Y3C1 178 aaKnown RBP11.97□□□□□ -0.49
GTF2F1-201ENST00000394456 HSPB2A8KAH6 182 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 E9PLN8 166 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 H3BUI4 141 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 VSIG8P0DPA2 414 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 TAF13Q15543 124 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 HSPB2Q16082 182 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF260Q3ZCT1 412 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 TRIM61Q5EBN2 209 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF385CQ66K41 422 aaPredicted RBP11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF546Q86UE3 836 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 BEST3Q8N1M1 668 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 OR10G3Q8NGC4 313 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 POC1BQ8TC44 478 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 NAT6Q93015 286 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 SPSB2Q99619 263 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 SELENOIQ9C0D9 397 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 PBOV1Q9GZY1 135 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 SERINC1Q9NRX5 453 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 A0A0A6YYD4 124 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 OR2T1O43869 369 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 PMP2P02689 132 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 M6PRP20645 277 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 PRKACBP22694 351 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 HRH1P35367 487 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 TMPPEQ6ZT21 453 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 ZNF584Q8IVC4 421 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 RNF133Q8WVZ7 376 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 BANF2Q9H503 90 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 CHST11Q9NPF2 352 aa11.96□□□□□ -0.49
GTF2F1-201ENST00000394456 OR5H14A6NHG9 310 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 LIPT2A6NK58 231 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 SSX5O60225 188 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 NUP62P37198 522 aaPredicted RBP11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 CAPZA1P52907 286 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 MYBPHQ13203 477 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 C1orf100Q5SVJ3 147 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 C1orf210Q8IVY1 113 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 ZNF454Q8N9F8 522 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 ROBO4Q8WZ75 1007 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 AQP3Q92482 292 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 POTEKPQ9BYX7 375 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 SLC17A5Q9NRA2 495 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 KLRF1Q9NZS2 232 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 KCNK7Q9Y2U2 307 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 LHFPL6Q9Y693 200 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 ANKUB1A6NFN9 424 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 RFPL4AA6NLU0 287 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 RFPL4AL1F8VTS6 287 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 MASP2O00187 686 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 RER1O15258 196 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 SYT7O43581 403 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 PMS2P2O95744 297 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 CELA2AP08217 269 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 CD37P11049 281 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 AKR1C4P17516 323 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 ATF4P18848 351 aaPredicted RBP11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 PI3P19957 117 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 CD34P28906 385 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 SFTPDP35247 375 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 LUMP51884 338 aaPredicted RBP11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 CLDN6P56747 220 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 QRFPP83859 136 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 KCTD9Q7L273 389 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 NAA40Q86UY6 237 aa11.95□□□□□ -0.5
GTF2F1-201ENST00000394456 COMMD2Q86X83 199 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms