RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 RPL22L1Q6P5R6 122 aaKnown RBP11.41□□□□□ -0.58
USP44-202ENST00000393091 RHNO1Q9BSD3 238 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 PLK3Q9H4B4 646 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 A0A1W2PR80 420 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 DANCRP0C864 163 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 GALP22466 123 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 APOBEC3AP31941 199 aaPredicted RBP11.41□□□□□ -0.58
USP44-202ENST00000393091 LIPAP38571 399 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 WNT4P56705 351 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 FAM209AQ5JX71 171 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 DMKNQ6E0U4 476 aaPredicted RBP11.41□□□□□ -0.58
USP44-202ENST00000393091 RORBQ92753 470 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 MRPL24Q96A35 216 aaKnown RBP11.41□□□□□ -0.58
USP44-202ENST00000393091 BABAM2Q9NXR7 383 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 IQCF6A8MYZ5 107 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 E7EQL1 145 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 ABCD4O14678 606 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 PLPP2O43688 288 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 ALX3O95076 343 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 MYL12AP19105 171 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 MST1LQ2TV78 715 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 LIPNQ5VXI9 398 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 ZNF367Q7RTV3 350 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 OVOL3O00110 214 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 ZNF12P17014 697 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 RPS27P42677 84 aaKnown RBP11.4□□□□□ -0.58
USP44-202ENST00000393091 PPP1CBP62140 327 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 MOGQ16653 247 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 LRRN1Q6UXK5 716 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 ALPK2Q86TB3 2170 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 PRSS35Q8N3Z0 413 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 SVOPQ8N4V2 548 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 AKAP1Q92667 903 aaKnown RBP eCLIP11.4□□□□□ -0.58
USP44-202ENST00000393091 MBD6Q96DN6 1003 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 ABCB9Q9NP78 766 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 NKIRAS2Q9NYR9 191 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 ERVK-18Q9QC07 812 aa11.4□□□□□ -0.58
USP44-202ENST00000393091 GPX5O75715 221 aa11.4□□□□□ -0.59
USP44-202ENST00000393091 PTBP3O95758 552 aaKnown RBP11.4□□□□□ -0.59
USP44-202ENST00000393091 PPOXP50336 477 aa11.4□□□□□ -0.59
USP44-202ENST00000393091 ZNF121P58317 390 aaPredicted RBP11.4□□□□□ -0.59
USP44-202ENST00000393091 SPOCK1Q08629 439 aa11.4□□□□□ -0.59
USP44-202ENST00000393091 FAM220AQ7Z4H9 259 aa11.4□□□□□ -0.59
USP44-202ENST00000393091 KLBQ86Z14 1044 aa11.4□□□□□ -0.59
USP44-202ENST00000393091 STX19Q8N4C7 294 aa11.4□□□□□ -0.59
USP44-202ENST00000393091 NINJ1Q92982 152 aa11.4□□□□□ -0.59
USP44-202ENST00000393091 CYSLTR2Q9NS75 346 aa11.4□□□□□ -0.59
USP44-202ENST00000393091 SLC22A13Q9Y226 551 aa11.4□□□□□ -0.59
USP44-202ENST00000393091 hCG_38984A0A1B0GV85 526 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 A0A1W2PPR1 153 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 PNPP00491 289 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 TTRP02766 147 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 CD55P08174 381 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 UBCP0CG48 685 aaKnown RBP11.39□□□□□ -0.59
USP44-202ENST00000393091 HSD11B1P28845 292 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 DDOSTP39656 456 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 GALK2Q01415 458 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 TPBGQ13641 420 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 ADIPOQQ15848 244 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 RFPL4BQ6ZWI9 263 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 AHSA2Q719I0 299 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 ZNF101Q8IZC7 436 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 SPARTQ8N0X7 666 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 ZNF786Q8N393 782 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 OR2G2Q8NGZ5 317 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 SNX33Q8WV41 574 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 PIGTQ969N2 578 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 C4orf36Q96KX1 117 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 PBOV1Q9GZY1 135 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 OR10A2Q9H208 303 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 A0A1B0GTI1 187 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 OR4C45A6NMZ5 311 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 ATP6V1G2-DDX39BF2Z307 99 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 GPRIN2O60269 458 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 DBHP09172 617 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 ATP6V1E1P36543 226 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 KIR3DL2P43630 455 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 MLLT11Q13015 90 aaPredicted RBP11.39□□□□□ -0.59
USP44-202ENST00000393091 ALKBH1Q13686 389 aaKnown RBP11.39□□□□□ -0.59
USP44-202ENST00000393091 TMEM42Q69YG0 159 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 KBTBD8Q8NFY9 601 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 SMAP2Q8WU79 429 aaPredicted RBP11.39□□□□□ -0.59
USP44-202ENST00000393091 SGK3Q96BR1 496 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 PIK3IP1Q96FE7 263 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 TRAF4Q9BUZ4 470 aaPredicted RBP11.39□□□□□ -0.59
USP44-202ENST00000393091 AMBNQ9NP70 447 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 ACOT13Q9NPJ3 140 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 CA10Q9NS85 328 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 OR52A1Q9UKL2 312 aa11.39□□□□□ -0.59
USP44-202ENST00000393091 GCN1Q92616 2671 aaKnown RBP11.39□□□□□ -0.59
USP44-202ENST00000393091 TMEM212A6NML5 194 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 B9A039 149 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 C21orf33P30042 268 aaPredicted RBP11.38□□□□□ -0.59
USP44-202ENST00000393091 GBX2P52951 348 aaPredicted RBP11.38□□□□□ -0.59
USP44-202ENST00000393091 OR12D2P58182 307 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 MFGE8Q08431 387 aaPredicted RBP11.38□□□□□ -0.59
USP44-202ENST00000393091 CDK5R1Q15078 307 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.38□□□□□ -0.59
USP44-202ENST00000393091 OR8B12Q8NGG6 310 aa11.38□□□□□ -0.59
USP44-202ENST00000393091 LYZL4Q96KX0 146 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms