RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 PLCXD2Q0VAA5 305 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 GAMTQ14353 236 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 NCF4Q15080 339 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 ZNF77Q15935 545 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 COMTD1Q86VU5 262 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 ORMDL3Q8N138 153 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 OR8K1Q8NGG5 319 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 TRMT10AQ8TBZ6 339 aaKnown RBP-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 MAGEE2Q8TD90 523 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 SLC13A3Q8WWT9 602 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 C4orf36Q96KX1 117 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 DNAJC30Q96LL9 226 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 SAMD8Q96LT4 415 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 TRIB3Q96RU7 358 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 OMDQ99983 421 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 TMEM243Q9BU79 118 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 VPS37BQ9H9H4 285 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 TMEM27Q9HBJ8 222 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 OR2S2Q9NQN1 319 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 SMOXQ9NWM0 555 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 PDP1Q9P0J1 537 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 N6AMT1Q9Y5N5 214 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 SOX21Q9Y651 276 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 KCNE3Q9Y6H6 103 aa-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 DIDO1Q9BTC0 2240 aaKnown RBP-0.71□□□□□ -2.52
RNU6-239P-201ENST00000390990 HRNRQ86YZ3 2850 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 IGKV1-27A0A075B6S5 117 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 IGKV1-6A0A0C4DH72 117 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 ZNF816-ZNF321PA0A0X1KG74 233 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 A0A1B0GVL5 298 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 MBLAC1A4D2B0 266 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 FFAR1O14842 300 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 CRTAPO75718 401 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 FARS2O95363 451 aaKnown RBP-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 EIF4EP06730 217 aaKnown RBP-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 ERGP11308 486 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 ETS1P14921 441 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 LAP3P28838 519 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 COILP38432 576 aaPredicted RBP-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 PRPHP41219 470 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 RBM34P42696 430 aaKnown RBP-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 ECH1Q13011 328 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 RALBP1Q15311 655 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 BLOC1S2Q6QNY1 142 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 BBS7Q8IWZ6 715 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 SELENOHQ8IZQ5 122 aaKnown RBP-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 ZCCHC24Q8N2G6 241 aaKnown RBP-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 KDM8Q8N371 416 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 MSANTD4Q8NCY6 345 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 OR10G6Q8NH81 332 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 OSTF1Q92882 214 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 CABS1Q96KC9 395 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 MS4A8Q9BY19 250 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 RAB18Q9NP72 206 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 MTFP1Q9UDX5 166 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 SLC7A11Q9UPY5 501 aa-0.72□□□□□ -2.52
RNU6-239P-201ENST00000390990 NCKAP5O14513 1909 aa-0.72□□□□□ -2.53
RNU6-239P-201ENST00000390990 NYNRINQ9P2P1 1898 aaKnown RBP-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 IGHV1-69DA0A0B4J2H0 117 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 PLPP1O14494 284 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 C1orf105O95561 183 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 TNNI3P19429 210 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 MSR1P21757 451 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 MUTP22033 750 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 HTR2AP28223 471 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 VHLP40337 213 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 DUSP3P51452 185 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 ACTG2P63267 376 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 DHRS2Q13268 280 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 MESDQ14696 234 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 QPRTQ15274 297 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 TMEM176BQ3YBM2 270 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 MDP1Q86V88 176 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 NPWQ8N729 165 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 OR2V1Q8NHB1 315 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 UBE2Q2Q8WVN8 375 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 ZNF514Q96K75 400 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 OR8B2Q96RD0 313 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 SPZ1Q9BXG8 430 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 CYSTM1Q9H1C7 97 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 PPA2Q9H2U2 334 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 XKR8Q9H6D3 395 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 CLN8Q9UBY8 286 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 SHANK3Q9BYB0 1731 aa-0.73□□□□□ -2.53
RNU6-239P-201ENST00000390990 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 A0A1W2PQL4 384 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 RGSL1A5PLK6 1076 aa-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 TIMM44O43615 452 aa-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 IGKV2D-40P01614 121 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 HSPD1P10809 573 aaKnown RBP-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 ZNF22P17026 224 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 DNAJB1P25685 340 aa-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 BLVRBP30043 206 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 TALDO1P37837 337 aa-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 MAGEA12P43365 314 aa-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 RPS23P62266 143 aaKnown RBP-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 CBX3Q13185 183 aa-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 PDK1Q15118 436 aa-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 C2orf76Q3KRA6 126 aa-0.74□□□□□ -2.53
RNU6-239P-201ENST00000390990 TMEM123Q8N131 208 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms