RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 OR1S2Q8NGQ3 325 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 OR1L1Q8NH94 360 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 IFT74Q96LB3 600 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TMEM243Q9BU79 118 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TPPP3Q9BW30 176 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PDP1Q9P0J1 537 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 LRRC42Q9Y546 428 aa0.24□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MUC5BQ9HC84 5762 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 LRRIQ3A6PVS8 624 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 K7EQM0 130 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CDC40O60508 579 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CDS2O95674 445 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 IGHV1-46P01743 117 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 IGHMP01871 453 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MT-ND4P03905 459 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 HSPD1P10809 573 aaKnown RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 DBTP11182 482 aaKnown RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 NELFEP18615 380 aaKnown RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TMED10P49755 219 aaKnown RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 FOXA1P55317 472 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 FGL1Q08830 312 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 NCF4Q15080 339 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 ZNF726P1Q15940 193 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 NADK2Q4G0N4 442 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 LDLRAD2Q5SZI1 272 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 GPR107Q5VW38 600 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MS4A15Q8N5U1 240 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CHST4Q8NCG5 386 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 GPR26Q8NDV2 337 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 RNASE11Q8TAA1 199 aaKnown RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 GHSRQ92847 366 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 DBNDD1Q9H9R9 158 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TMEM9BQ9NQ34 198 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MTCH1Q9NZJ7 389 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 LSM7Q9UK45 103 aaKnown RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PTBP2Q9UKA9 531 aaKnown RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 FARSAQ9Y285 508 aaKnown RBP0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 DYSFO75923 2080 aa0.23□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PLXNA3P51805 1871 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 SPATA31E1Q6ZUB1 1445 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MALRD1Q5VYJ5 2156 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MED13Q9UHV7 2174 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TRAV26-1A0A087WT03 109 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 HAS3O00219 553 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 S1PR2O95136 353 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TMEM50AO95807 157 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 KRT8P05787 483 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 THRAP10827 490 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PRKACBP22694 351 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 U2AF2P26368 475 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 POLR2IP36954 125 aaKnown RBP0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 MRPS22P82650 360 aaKnown RBP0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PAGE2Q7Z2X7 111 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 TICAM2Q86XR7 235 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 ZNF606Q8WXB4 792 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 RLN3Q8WXF3 142 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 OR5B12Q96R08 314 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 PDCD1LG2Q9BQ51 273 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 NUP50Q9UKX7 468 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 AHNAKQ09666 5890 aaKnown RBP0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 VWA8A3KMH1 1905 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 KMT2EQ8IZD2 1858 aa0.22□□□□□ -2.37
RNU6-1040P-201ENST00000383974 CR1P17927 2039 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 COL4A1P02462 1669 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 COL6A6A6NMZ7 2263 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 A0A1B0GVL5 298 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 PHGR1C9JFL3 82 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 TIMM8AO60220 97 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 ATP1B2P14415 290 aaPredicted RBP0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 IFNA8P32881 189 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 DGCR6Q14129 220 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 H2BFWTQ7Z2G1 175 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 EIF4E3Q8N5X7 224 aaKnown RBP0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 OR1L6Q8NGR2 347 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 OR1L4Q8NGR5 311 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 OR2T34Q8NGX1 318 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 TMEM230Q96A57 120 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 KCNS1Q96KK3 526 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 MED4Q9NPJ6 270 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 POLE3Q9NRF9 147 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 ETNK2Q9NVF9 386 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 TAS2R3Q9NYW6 316 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 CSDC2Q9Y534 153 aaKnown RBP0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 SSH2Q76I76 1423 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 LOXHD1Q8IVV2 1947 aa0.21□□□□□ -2.38
RNU6-1040P-201ENST00000383974 IGKV1-27A0A075B6S5 117 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 A0A1W2PPE3 182 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 A8MWL6 223 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 TAAR5O14804 337 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 SCO1O75880 301 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 TSPAN12O95859 305 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 NRASP01111 189 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 HRASP01112 189 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 KRASP01116 189 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 ZNF708P17019 499 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 GZMHP20718 246 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 SSR1P43307 286 aaKnown RBP0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 OR1G1P47890 313 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 LGALS7P47929 136 aa0.2□□□□□ -2.38
RNU6-1040P-201ENST00000383974 TAS2R46P59540 309 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms