RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ECH1Q13011 328 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 USF2Q15853 346 aaPredicted RBP12.41□□□□□ -0.42
SDC1-202ENST00000381150 ZNF813Q6ZN06 617 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 TMEM229BQ8NBD8 167 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 SLC37A2Q8TED4 501 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 TMEM41AQ96HV5 264 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 PRO1933Q9H354 126 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 GPR27Q9NS67 375 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 CD207Q9UJ71 328 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 MMP17Q9ULZ9 603 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 DTX4Q9Y2E6 619 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 CARHSP1Q9Y2V2 147 aaKnown RBP12.41□□□□□ -0.42
SDC1-202ENST00000381150 BRWD1Q9NSI6 2320 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 C7orf77A4D0Y5 90 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 FAM221BA6H8Z2 402 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 C5orf52A6NGY3 159 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 SEMA4FO95754 770 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 TXNDC12O95881 172 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 CD74P04233 296 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 RAB32Q13637 225 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 TMEM225Q6GV28 225 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 CYYR1Q96J86 154 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 MEGF10Q96KG7 1140 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 STACQ99469 402 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 FAM60AQ9NP50 221 aa12.41□□□□□ -0.42
SDC1-202ENST00000381150 LSM5Q9Y4Y9 91 aaKnown RBP12.41□□□□□ -0.42
SDC1-202ENST00000381150 A0A0J9YY10 115 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 H0YIZ8 118 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 MBTPS2O43462 519 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 TNFP01375 233 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 CD14P08571 375 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 IFI6P09912 130 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 SLC25A4P12235 298 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 ZNF10P21506 573 aaPredicted RBP12.4□□□□□ -0.42
SDC1-202ENST00000381150 ZBTB25P24278 435 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 ACTBL2Q562R1 376 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 ZNF542PQ5EBM4 170 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 CDPF1Q6NVV7 123 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 LPCAT3Q6P1A2 487 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 SSX9Q7RTT3 188 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 LINC00346Q8IVM7 164 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 SKA3Q8IX90 412 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 ZNF679Q8IYX0 411 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 C4orf45Q96LM5 186 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 WRBO00258 174 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 ZNF354AO60765 605 aaPredicted RBP12.4□□□□□ -0.42
SDC1-202ENST00000381150 S1PR1P21453 382 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 RASGEF1BQ0VAM2 473 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 KIAA0141Q14154 515 aaPredicted RBP12.4□□□□□ -0.42
SDC1-202ENST00000381150 RNF212Q495C1 297 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 ZNF550Q7Z398 422 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 PRR22Q8IZ63 422 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 SMRP1Q8NCR6 262 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 ALX4Q9H161 411 aaPredicted RBP12.4□□□□□ -0.42
SDC1-202ENST00000381150 C8orf33Q9H7E9 229 aaPredicted RBP12.4□□□□□ -0.42
SDC1-202ENST00000381150 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.4□□□□□ -0.42
SDC1-202ENST00000381150 SLCO1B1Q9Y6L6 691 aa12.4□□□□□ -0.42
SDC1-202ENST00000381150 A0A1B0GTI1 187 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 C17orf51A8MQB3 221 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 MPZL1O95297 269 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 LAP3P28838 519 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 EIF2S3P41091 472 aaKnown RBP12.4□□□□□ -0.43
SDC1-202ENST00000381150 RABIFP47224 123 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 CAV2P51636 162 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 CLDN6P56747 220 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 PRPS1P60891 318 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 MFGE8Q08431 387 aaPredicted RBP12.4□□□□□ -0.43
SDC1-202ENST00000381150 SLC35D3Q5M8T2 416 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 ZNF529Q6P280 563 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 RCBTB1Q8NDN9 531 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 CA5BP1Q8WTZ4 195 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 METTL21AQ8WXB1 218 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 ST6GALNAC5Q9BVH7 336 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 MFRPQ9BY79 579 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 SEC61A2Q9H9S3 476 aa12.4□□□□□ -0.43
SDC1-202ENST00000381150 TDRD6O60522 2096 aaKnown RBP12.39□□□□□ -0.43
SDC1-202ENST00000381150 MPDZO75970 2070 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 SPTY2D1-AS1A0A0U1RR47 76 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 PRAMEF26H0Y7S4 382 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 IGLV3-19P01714 112 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 FHITP49789 147 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 RPL18Q07020 188 aaKnown RBP12.39□□□□□ -0.43
SDC1-202ENST00000381150 ARFRP1Q13795 201 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 FZD2Q14332 565 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 GGTLC2Q14390 218 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 CBLN3Q6UW01 205 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 OR2I1PQ8NGU4 316 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 KIR2DS5A0A0G2JLQ3 304 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 A0A0G2JNG1 304 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 KIR2DS3K7RE56 304 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 DCDP81605 110 aaKnown RBP12.39□□□□□ -0.43
SDC1-202ENST00000381150 KIR2DS5Q14953 304 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 C1QL3Q5VWW1 255 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 ZNF383Q8NA42 475 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 OR10H5Q8NGA6 315 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 OR4K15Q8NH41 348 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 MITD1Q8WV92 249 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 TOLLIPQ9H0E2 274 aa12.39□□□□□ -0.43
SDC1-202ENST00000381150 TRBV5-5A0A0J9YX44 114 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms