RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 MRPS26Q9BYN8 205 aaKnown RBP16.62■□□□□ 0.25
GTF3A-201ENST00000381140 RAB1BQ9H0U4 201 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 MARCH7Q9H992 704 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 CNOT2Q9NZN8 540 aaKnown RBP16.62■□□□□ 0.25
GTF3A-201ENST00000381140 PSORS1C1Q9UIG5 152 aa16.62■□□□□ 0.25
GTF3A-201ENST00000381140 A0A087WXM4 84 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 CCDC182A6NF36 153 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 SNTNA6NMZ2 147 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 ICMTO60725 284 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 ERCC1P07992 297 aaPredicted RBP16.61■□□□□ 0.25
GTF3A-201ENST00000381140 ACSM4P0C7M7 580 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 NAT2P11245 290 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 SLC15A1P46059 708 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 PRKXP51817 358 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 EFNA4P52798 201 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 TPTEP56180 551 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 BLMHQ13867 455 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 PCK2Q16822 640 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 CLEC12BQ2HXU8 276 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 RSPO1Q2MKA7 263 aaPredicted RBP16.61■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF773Q6PK81 442 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 PRSS57Q6UWY2 283 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 SHFQ7M4L6 423 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 NAA40Q86UY6 237 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 GID4Q8IVV7 300 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 ST7LQ8TDW4 575 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 THEM6Q8WUY1 208 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 SNX33Q8WV41 574 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 TEAD3Q99594 435 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 ABHD6Q9BV23 337 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 PAK1IP1Q9NWT1 392 aaPredicted RBP16.61■□□□□ 0.25
GTF3A-201ENST00000381140 RPL36Q9Y3U8 105 aaKnown RBP16.61■□□□□ 0.25
GTF3A-201ENST00000381140 N6AMT1Q9Y5N5 214 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 CELSR1Q9NYQ6 3014 aa16.61■□□□□ 0.25
GTF3A-201ENST00000381140 F8P00451 2351 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 EFCAB10A6NFE3 127 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF878C9JN71 531 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 M0R135 149 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 LCATP04180 440 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 PIPP12273 146 aaPredicted RBP16.6■□□□□ 0.25
GTF3A-201ENST00000381140 RGS6P49758 472 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 HCCSP53701 268 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF91Q05481 1191 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 CARTPTQ16568 116 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 MEPCEQ7L2J0 689 aaKnown RBP16.6■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF540Q8NDQ6 660 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 GTF3AQ92664 365 aaKnown RBP16.6■□□□□ 0.25
GTF3A-201ENST00000381140 RFKQ969G6 155 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 APOBEC3DQ96AK3 386 aaPredicted RBP16.6■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF799Q96GE5 643 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 SIGLEC11Q96RL6 698 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 AMELYQ99218 206 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 SLCO1C1Q9NYB5 712 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 GPR160Q9UJ42 338 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 FBXO9Q9UK97 447 aaPredicted RBP16.6■□□□□ 0.25
GTF3A-201ENST00000381140 KLHDC2Q9Y2U9 406 aa16.6■□□□□ 0.25
GTF3A-201ENST00000381140 IGLV3-9A0A075B6K5 115 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 TRIM64BA6NI03 449 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 TIMM8AO60220 97 aaPredicted RBP16.59■□□□□ 0.25
GTF3A-201ENST00000381140 DBTP11182 482 aaKnown RBP16.59■□□□□ 0.25
GTF3A-201ENST00000381140 EEF1B2P24534 225 aaKnown RBP16.59■□□□□ 0.25
GTF3A-201ENST00000381140 CDH15P55291 814 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 TMED1Q13445 227 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 HLXQ14774 488 aaPredicted RBP16.59■□□□□ 0.25
GTF3A-201ENST00000381140 KRTAP27-1Q3LI81 207 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 TMEM255AQ5JRV8 349 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 C1orf174Q8IYL3 243 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF525Q8N782 197 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 ZNF283Q8N7M2 679 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 OR5L1Q8NGL2 311 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 GGHQ92820 318 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 CMBLQ96DG6 245 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 MS4A5Q9H3V2 200 aa16.59■□□□□ 0.25
GTF3A-201ENST00000381140 DDX28Q9NUL7 540 aaKnown RBP16.59■□□□□ 0.25
GTF3A-201ENST00000381140 MRPS18AQ9NVS2 196 aaKnown RBP16.59■□□□□ 0.25
GTF3A-201ENST00000381140 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.59■□□□□ 0.25
GTF3A-201ENST00000381140 PTGES3LE9PB15 166 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 F12P00748 615 aaPredicted RBP16.58■□□□□ 0.24
GTF3A-201ENST00000381140 IGHV3-13P01766 116 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 HTR1AP08908 422 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 SLC2A1P11166 492 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 HSD11B1P28845 292 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 HTR1FP30939 366 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 MOGQ16653 247 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 MBNL2Q5VZF2 373 aaKnown RBP16.58■□□□□ 0.24
GTF3A-201ENST00000381140 SLC16A9Q7RTY1 509 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 ZNF454Q8N9F8 522 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 OTOSQ8NHW6 89 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 SGCDQ92629 289 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 MYDGFQ969H8 173 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 COG8Q96MW5 612 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 CNN2Q99439 309 aaKnown RBP16.58■□□□□ 0.24
GTF3A-201ENST00000381140 KCNJ15Q99712 375 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 RHNO1Q9BSD3 238 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 TTTY10Q9BZA0 68 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 AMBNQ9NP70 447 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 LAMP5Q9UJQ1 280 aa16.58■□□□□ 0.24
GTF3A-201ENST00000381140 FLNAP21333 2647 aaKnown RBP16.58■□□□□ 0.24
GTF3A-201ENST00000381140 PLSCR5A0PG75 271 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 IRGMA1A4Y4 181 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms