RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 DBTP11182 482 aaKnown RBP16.04■□□□□ 0.16
SSU72-203ENST00000378725 RAC2P15153 192 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 SLC6A9P48067 706 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 CX3CR1P49238 355 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 ZNF91Q05481 1191 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 SNAI3Q3KNW1 292 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 ZNF322Q6U7Q0 402 aaPredicted RBP16.04■□□□□ 0.16
SSU72-203ENST00000378725 KRT77Q7Z794 578 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 C8orf59Q8N0T1 100 aaPredicted RBP16.04■□□□□ 0.16
SSU72-203ENST00000378725 RFLNBQ8N5W9 214 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 LGALS12Q96DT0 336 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 MROQ9BYG7 248 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 SP140LQ9H930 580 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 TAAR3PQ9P1P4 343 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 GPR160Q9UJ42 338 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 LRP12Q9Y561 859 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 PCDHGB1Q9Y5G3 927 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 RTTNQ86VV8 2226 aa16.04■□□□□ 0.16
SSU72-203ENST00000378725 C5orf63A6NC05 138 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 KITLGP21583 273 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 ANOS1P23352 680 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 ALDH3B1P43353 468 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 ART1P52961 327 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 ZNF121P58317 390 aaPredicted RBP16.03■□□□□ 0.16
SSU72-203ENST00000378725 CDK5R2Q13319 367 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 TESK1Q15569 626 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 SMN1Q16637 294 aaKnown RBP16.03■□□□□ 0.16
SSU72-203ENST00000378725 C6orf52Q5T4I8 152 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 ZNF684Q5T5D7 378 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 SSX6Q7RTT6 188 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 CNIH3Q8TBE1 160 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 MS4A5Q9H3V2 200 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 AMBNQ9NP70 447 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 PTTG3PQ9NZH4 202 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 PLCE1Q9P212 2302 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 POLQO75417 2590 aa16.03■□□□□ 0.16
SSU72-203ENST00000378725 A0A1W2PPW3 197 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 ACOD1A6NK06 481 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 M0R233 179 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 PSMD9O00233 223 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 ADRA2AP08913 450 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 SLC2A1P11166 492 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 LIPAP38571 399 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 MMP15P51511 669 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 ATP5J2P56134 94 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 ZNF85Q03923 595 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 RAB40BQ12829 278 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 MALLQ13021 153 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 HLXQ14774 488 aaPredicted RBP16.02■□□□□ 0.16
SSU72-203ENST00000378725 PRSS57Q6UWY2 283 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 THAP5Q7Z6K1 395 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 OR10H4Q8NGA5 316 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 PERPQ96FX8 193 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 TBX5Q99593 518 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 MRM2Q9UI43 246 aaKnown RBP16.02■□□□□ 0.16
SSU72-203ENST00000378725 PURGQ9UJV8 347 aaKnown RBP16.02■□□□□ 0.16
SSU72-203ENST00000378725 ITGB1BP2Q9UKP3 347 aa16.02■□□□□ 0.16
SSU72-203ENST00000378725 NOTCH2Q04721 2471 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 NDUFS7O75251 213 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 F12P00748 615 aaPredicted RBP16.01■□□□□ 0.15
SSU72-203ENST00000378725 IGHV4-39P01824 125 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 ANXA2P07355 339 aaKnown RBP16.01■□□□□ 0.15
SSU72-203ENST00000378725 RIDAP52758 137 aaKnown RBP16.01■□□□□ 0.15
SSU72-203ENST00000378725 PSMA6P60900 246 aaKnown RBP16.01■□□□□ 0.15
SSU72-203ENST00000378725 ACTC1P68032 377 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 ACTA1P68133 377 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 GK2Q14410 553 aaPredicted RBP16.01■□□□□ 0.15
SSU72-203ENST00000378725 ALKBH6Q3KRA9 238 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 KLHL22Q53GT1 634 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 GLYATL3Q5SZD4 288 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 LAIR2Q6ISS4 152 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 ZCCHC24Q8N2G6 241 aaKnown RBP16.01■□□□□ 0.15
SSU72-203ENST00000378725 OR52H1Q8NGJ2 320 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 SPSB4Q96A44 273 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 SGK3Q96BR1 496 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 SORCS2Q96PQ0 1159 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 REPIN1Q9BWE0 567 aaKnown RBP16.01■□□□□ 0.15
SSU72-203ENST00000378725 RAB1BQ9H0U4 201 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 DYNLRB1Q9NP97 96 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 FAM206AQ9NX38 181 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 ZNF319Q9P2F9 582 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 CGGBP1Q9UFW8 167 aaPredicted RBP16.01■□□□□ 0.15
SSU72-203ENST00000378725 IKZF2Q9UKS7 526 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 AKAP6Q13023 2319 aa16.01■□□□□ 0.15
SSU72-203ENST00000378725 CSMD1Q96PZ7 3565 aa16■□□□□ 0.15
SSU72-203ENST00000378725 METTL15A6NJ78 407 aa16■□□□□ 0.15
SSU72-203ENST00000378725 MAGEB4O15481 346 aaPredicted RBP16■□□□□ 0.15
SSU72-203ENST00000378725 XRCC2O43543 280 aa16■□□□□ 0.15
SSU72-203ENST00000378725 SRSF10O75494 262 aaKnown RBP16■□□□□ 0.15
SSU72-203ENST00000378725 SULT1C4O75897 302 aa16■□□□□ 0.15
SSU72-203ENST00000378725 FADS2O95864 444 aaKnown RBP16■□□□□ 0.15
SSU72-203ENST00000378725 NAT2P11245 290 aa16■□□□□ 0.15
SSU72-203ENST00000378725 VHLP40337 213 aa16■□□□□ 0.15
SSU72-203ENST00000378725 HSPA13P48723 471 aa16■□□□□ 0.15
SSU72-203ENST00000378725 MMP16P51512 607 aa16■□□□□ 0.15
SSU72-203ENST00000378725 EFNA4P52798 201 aa16■□□□□ 0.15
SSU72-203ENST00000378725 ZNF92Q03936 586 aa16■□□□□ 0.15
SSU72-203ENST00000378725 NKPD1Q17RQ9 610 aa16■□□□□ 0.15
SSU72-203ENST00000378725 SHEQ5VZ18 495 aa16■□□□□ 0.15
SSU72-203ENST00000378725 IZUMO2Q6UXV1 221 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms