RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 DAPP51397 102 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 ZMAT1Q5H9K5 638 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 TEX30Q5JUR7 227 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 SLC27A4Q6P1M0 643 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 SPATC1Q76KD6 591 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 DPY19L4Q7Z388 723 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 OTULINQ96BN8 352 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 SLAMF6Q96DU3 332 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 ZNF582Q96NG8 517 aaPredicted RBP12.99□□□□□ -0.33
RAB4B-202ENST00000378307 SIGLEC11Q96RL6 698 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 AMELYQ99218 206 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 SLC30A2Q9BRI3 323 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 OR51V1Q9H2C8 321 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 ZNF665Q9H7R5 613 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 IL19Q9UHD0 177 aa12.99□□□□□ -0.33
RAB4B-202ENST00000378307 TMEFF2Q9UIK5 374 aaPredicted RBP12.99□□□□□ -0.33
RAB4B-202ENST00000378307 SURF4O15260 269 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 IGHV2-5P01817 119 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 HLA-DPB1P04440 258 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 SLC2A1P11166 492 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 SELEP16581 610 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 HOXB6P17509 224 aaKnown RBP12.98□□□□□ -0.33
RAB4B-202ENST00000378307 PRKXP51817 358 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 DVL1P1P54792 670 aaPredicted RBP12.98□□□□□ -0.33
RAB4B-202ENST00000378307 TPTEP56180 551 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 PLBD1Q6P4A8 553 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 SHQ1Q6PI26 577 aaKnown RBP12.98□□□□□ -0.33
RAB4B-202ENST00000378307 ERI1Q8IV48 349 aaKnown RBP12.98□□□□□ -0.33
RAB4B-202ENST00000378307 TIGD4Q8IY51 512 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 ZNF283Q8N7M2 679 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 ATG16L2Q8NAA4 619 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 BBS1Q8NFJ9 593 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 OR2AE1Q8NHA4 323 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 YY1AP1Q9H869 796 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 MARCH7Q9H992 704 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 GCM1Q9NP62 436 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 CENPMQ9NSP4 180 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 TMEM106BQ9NUM4 274 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 HIF1ANQ9NWT6 349 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 LPAR3Q9UBY5 353 aa12.98□□□□□ -0.33
RAB4B-202ENST00000378307 COL6A5A8TX70 2615 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 A0A1B0GWJ7 208 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 F5H5P2 479 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 GLCEO94923 617 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 IGHV2-70P01814 119 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 MSMBP08118 114 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 GSTT1P30711 240 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 PMELP40967 661 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 ZNF92Q03936 586 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 GLYATL3Q5SZD4 288 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 FAHD1Q6P587 224 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 OR13G1Q8NGZ3 307 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 ZNF420Q8TAQ5 688 aaPredicted RBP12.97□□□□□ -0.33
RAB4B-202ENST00000378307 RAB1CQ92928 201 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 SPTSSAQ969W0 71 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 TMEM186Q96B77 213 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 ZMYND19Q96E35 227 aaPredicted RBP12.97□□□□□ -0.33
RAB4B-202ENST00000378307 MEGF10Q96KG7 1140 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 KCNJ15Q99712 375 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 COPS4Q9BT78 406 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 ZNF556Q9HAH1 456 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 NPTNQ9Y639 398 aa12.97□□□□□ -0.33
RAB4B-202ENST00000378307 PLPP2O43688 288 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 SELENOFO60613 162 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 MITFO75030 526 aaPredicted RBP12.96□□□□□ -0.33
RAB4B-202ENST00000378307 ATP5HO75947 161 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 SRD5A1P18405 259 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 TNFRSF1AP19438 455 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 TNFSF4P23510 183 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 EPHA2P29317 976 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 SLC6A9P48067 706 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 SRSF2Q01130 221 aaKnown RBP12.96□□□□□ -0.33
RAB4B-202ENST00000378307 EIF2B1Q14232 305 aaKnown RBP12.96□□□□□ -0.33
RAB4B-202ENST00000378307 C1orf229Q6ZS94 237 aaPredicted RBP12.96□□□□□ -0.33
RAB4B-202ENST00000378307 PGAP1Q75T13 922 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 AMIGO2Q86SJ2 522 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 GLCCI1Q86VQ1 547 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 CPOQ8IVL8 374 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 OR6N2Q8NGY6 317 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 NRBF2Q96F24 287 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 TIMD4Q96H15 378 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 INTS14Q96SY0 518 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 ABHD6Q9BV23 337 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 REPIN1Q9BWE0 567 aaKnown RBP12.96□□□□□ -0.33
RAB4B-202ENST00000378307 SLC25A19Q9HC21 320 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 PPP1R3CQ9UQK1 317 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 N6AMT1Q9Y5N5 214 aa12.96□□□□□ -0.33
RAB4B-202ENST00000378307 ISPDA4D126 451 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 PRR23D1E9PI22 279 aaPredicted RBP12.95□□□□□ -0.34
RAB4B-202ENST00000378307 ZNF205O95201 554 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 AVPP01185 164 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 HMGN1P05114 100 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 SBK2P0C263 348 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 PRR23D2P0DMB1 279 aaPredicted RBP12.95□□□□□ -0.34
RAB4B-202ENST00000378307 SLC2A5P22732 501 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 RASSF2P50749 326 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 MMP16P51512 607 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 BLVRAP53004 296 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 CRISP1P54107 249 aa12.95□□□□□ -0.34
RAB4B-202ENST00000378307 HOXA4Q00056 320 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms