RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 APOBEC1P41238 236 aaKnown RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 RBM34P42696 430 aaKnown RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 CAPZA1P52907 286 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 FOXG1P55316 489 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 TNK1Q13470 666 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 HLXQ14774 488 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 OXA1LQ15070 435 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 HIKESHIQ53FT3 197 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 DCAF10Q5QP82 559 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 STPG1Q5TH74 334 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 MRPL21Q7Z2W9 205 aaKnown RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 RNF144BQ7Z419 303 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 RTN4RL2Q86UN3 420 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 FTMTQ8N4E7 242 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 SNIP1Q8TAD8 396 aaKnown RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF799Q96GE5 643 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 SRRQ9GZT4 340 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 FGF20Q9NP95 211 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 HIF3AQ9Y2N7 669 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 KALRNO60229 2985 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 C5orf63A6NC05 138 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 HMX3A6NHT5 357 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 B8ZZF3 427 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 AQP8O94778 261 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 SPDEFO95238 335 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 FTH1P19P0C7X4 201 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 HOXA4Q00056 320 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 IL11RAQ14626 422 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 OR2B11Q5JQS5 317 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 LSMEM1Q8N8F7 131 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 WDSUB1Q8N9V3 476 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 SUMF1Q8NBK3 374 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 OR4D10Q8NGI6 311 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 COQ8AQ8NI60 647 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 OR2B2Q9GZK3 357 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 COMMD9Q9P000 198 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 MGAT4AQ9UM21 535 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 ACANP16112 2415 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 ACOT7O00154 380 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 FABP7O15540 132 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 EFNA2O43921 213 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 TGM1P22735 817 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 DNASE1P24855 282 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 GABRA4P48169 554 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 EVX1P49640 407 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 SLC35A1P78382 337 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 TAGLNQ01995 201 aaKnown RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 EXT1Q16394 746 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 IDO2Q6ZQW0 420 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 TRAPPC6BQ86SZ2 158 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 MYPOPQ86VE0 399 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 LRRC28Q86X40 367 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 CMIPQ8IY22 773 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 MAML2Q8IZL2 1156 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 OR5D14Q8NGL3 314 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 HOXB13Q92826 284 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 KISS1RQ969F8 398 aaPredicted RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 TAAR9Q96RI9 348 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 BCL7BQ9BQE9 202 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 PBOV1Q9GZY1 135 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 PPP1R3EQ9H7J1 279 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 NOX3Q9HBY0 568 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 MRPL22Q9NWU5 206 aaKnown RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 PTTG3PQ9NZH4 202 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 MRPS28Q9Y2Q9 187 aaKnown RBP7.2□□□□□ -1.26
CKAP2-203ENST00000378037 NOX1Q9Y5S8 564 aa7.2□□□□□ -1.26
CKAP2-203ENST00000378037 A0A0A6YYH2 397 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 ANKUB1A6NFN9 424 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 A6NJ64 397 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 C9orf172C9J069 976 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 AGPAT2O15120 278 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 DHHO43323 396 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 STOMP27105 288 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 OR3A4PP47883 348 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 MEOX1P50221 254 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 MLF1P58340 268 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 POU4F3Q15319 338 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 PHLDA2Q53GA4 152 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 AGAP7PQ5VUJ5 663 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 NCCRP1Q6ZVX7 275 aaPredicted RBP7.19□□□□□ -1.26
CKAP2-203ENST00000378037 AGAP4Q96P64 663 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 NEURL2Q9BR09 285 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 NICN1Q9BSH3 213 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 OBP2BQ9NPH6 170 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 POLE3Q9NRF9 147 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 NXT1Q9UKK6 140 aaKnown RBP7.19□□□□□ -1.26
CKAP2-203ENST00000378037 MED19A0JLT2 244 aaPredicted RBP7.19□□□□□ -1.26
CKAP2-203ENST00000378037 PINLYPA6NC86 204 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 PRR19A6NJB7 356 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 LIPT2A6NK58 231 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 ZNF736B4DX44 427 aaPredicted RBP7.19□□□□□ -1.26
CKAP2-203ENST00000378037 B4DXG7 233 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 PIN1P1O15428 100 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 EPHA1P21709 976 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 RAD52P43351 418 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 RRADP55042 308 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 RPS16P62249 146 aaKnown RBP7.19□□□□□ -1.26
CKAP2-203ENST00000378037 TLE1Q04724 770 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 ECH1Q13011 328 aa7.19□□□□□ -1.26
CKAP2-203ENST00000378037 SLC10A1Q14973 349 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms