RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 OR52J3Q8NH60 311 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 ZNF420Q8TAQ5 688 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-204ENST00000376643 PYURFQ96I23 114 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 C7orf34Q96L11 122 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 NMNAT3Q96T66 252 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 FN3KRPQ9HA64 309 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 SRA1Q9HD15 236 aaKnown RBP12.36□□□□□ -0.43
HDAC6-204ENST00000376643 NDE1Q9NXR1 346 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 GMPR2Q9P2T1 348 aaKnown RBP12.36□□□□□ -0.43
HDAC6-204ENST00000376643 PCDHGB1Q9Y5G3 927 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 KIR2DS1A0A191URI9 304 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 F5H5K5 113 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 F5H5P2 479 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 NDUFA2O43678 99 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 CYB5R3P00387 301 aaPredicted RBP12.35□□□□□ -0.43
HDAC6-204ENST00000376643 LCATP04180 440 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 ACSM4P0C7M7 580 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 CD80P33681 288 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 ERFP50548 548 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 TRAP1Q12931 704 aaKnown RBP12.35□□□□□ -0.43
HDAC6-204ENST00000376643 SEC23BQ15437 767 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 C11orf91Q3C1V1 193 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 KRTAP27-1Q3LI81 207 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 SPATS1Q496A3 300 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 SLC18B1Q6NT16 456 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 TSEN54Q7Z6J9 526 aaKnown RBP12.35□□□□□ -0.43
HDAC6-204ENST00000376643 OR6V1Q8N148 313 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 GNPDA2Q8TDQ7 276 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 NUDT16L1Q9BRJ7 211 aaKnown RBP12.35□□□□□ -0.43
HDAC6-204ENST00000376643 TMEM246Q9BRR3 403 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 RPRD1BQ9NQG5 326 aaKnown RBP12.35□□□□□ -0.43
HDAC6-204ENST00000376643 CYB5R1Q9UHQ9 305 aa12.35□□□□□ -0.43
HDAC6-204ENST00000376643 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-204ENST00000376643 TMPRSS2O15393 492 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 MLNRO43193 412 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 GMDSO60547 372 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 KRT36O76013 467 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 PLATP00750 562 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 FABP3P05413 133 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 HSD17B1P14061 328 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 HIST1H1CP16403 213 aaKnown RBP12.34□□□□□ -0.43
HDAC6-204ENST00000376643 GGT2P36268 569 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 FXYD6P3P58550 94 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 GK2Q14410 553 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-204ENST00000376643 OR8G1Q15617 311 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 MEP1BQ16820 701 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 SAMD4BQ5PRF9 694 aaKnown RBP12.34□□□□□ -0.43
HDAC6-204ENST00000376643 ZNF362Q5T0B9 420 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-204ENST00000376643 CORO6Q6QEF8 472 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 OR2T4Q8NH00 348 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 OR4K13Q8NH42 304 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 ZDHHC16Q969W1 377 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 NSMCE2Q96MF7 247 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 TSSK2Q96PF2 358 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 FUZQ9BT04 418 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 SLITRK2Q9H156 845 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 NOX4Q9NPH5 578 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 ERVK-18Q9QC07 812 aa12.34□□□□□ -0.43
HDAC6-204ENST00000376643 TRAV38-1A0A0B4J264 116 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 TRAV40A0A0B4J280 105 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 M0R135 149 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 DCTN6O00399 190 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 CRYBA1P05813 215 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 BLVRAP53004 296 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 PAX2Q02962 417 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 TSPAN31Q12999 210 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 C16orf87Q6PH81 154 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 DRAM2Q6UX65 266 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 ZNF620Q6ZNG0 422 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 CFAP77Q6ZQR2 320 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 LINC00346Q8IVM7 164 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 SLCO4A1Q96BD0 722 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 ZNF799Q96GE5 643 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 SP140LQ9H930 580 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 UNKLQ9H9P5 680 aaKnown RBP12.33□□□□□ -0.44
HDAC6-204ENST00000376643 MRPL15Q9P015 296 aaKnown RBP12.33□□□□□ -0.44
HDAC6-204ENST00000376643 RNF7Q9UBF6 113 aa12.33□□□□□ -0.44
HDAC6-204ENST00000376643 GGT3PA6NGU5 568 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 H0YL77 283 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 P2RY10O00398 339 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 DIRAS1O95057 198 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 RRM2P31350 389 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 DDOSTP39656 456 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 GSSP48637 474 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 RPL15P61313 204 aaKnown RBP12.32□□□□□ -0.44
HDAC6-204ENST00000376643 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.32□□□□□ -0.44
HDAC6-204ENST00000376643 SLC9A3R2Q15599 337 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 SNCBQ16143 134 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 OTPQ5XKR4 325 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 WDR25Q64LD2 544 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-204ENST00000376643 PGAM4Q8N0Y7 254 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 BCL6BQ8N143 479 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-204ENST00000376643 TMEM86BQ8N661 226 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 PNLDC1Q8NA58 520 aaKnown RBP12.32□□□□□ -0.44
HDAC6-204ENST00000376643 SDR9C7Q8NEX9 313 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 PROKR2Q8NFJ6 384 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 FAM71F1Q96KD3 344 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-204ENST00000376643 DUX5Q96PT3 197 aa12.32□□□□□ -0.44
HDAC6-204ENST00000376643 ADAT1Q9BUB4 502 aaKnown RBP12.32□□□□□ -0.44
HDAC6-204ENST00000376643 MYLK2Q9H1R3 596 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms