RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 KLF7O75840 302 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 NQO2P16083 231 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 APOBEC1P41238 236 aaKnown RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM268Q5VZI3 342 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 H1FNTQ75WM6 255 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 LYG2Q86SG7 212 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 OR4S1Q8NGB4 309 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 IRS1P35568 1242 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 CDC34P49427 236 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 OR4A4PQ8NGN8 299 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 OR1L1Q8NH94 360 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 PIGTQ969N2 578 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 KCND3Q9UK17 655 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 OR52A4PA6NMU1 304 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 CCSO14618 274 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 MMP11P24347 488 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 EPHA2P29317 976 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 OR10D4PQ8NGN7 298 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 MOB3AQ96BX8 217 aa10.64□□□□□ -0.71
VPS13A-205ENST00000376636 LSM2Q9Y333 95 aaKnown RBP10.64□□□□□ -0.71
VPS13A-205ENST00000376636 SMAD2Q15796 467 aaKnown RBP10.63□□□□□ -0.71
VPS13A-205ENST00000376636 DEFB133Q30KQ1 61 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 SLCO4A1Q96BD0 722 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 SORBS1Q9BX66 1292 aaKnown RBP10.63□□□□□ -0.71
VPS13A-205ENST00000376636 HES7Q9BYE0 225 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 FLVCR2Q9UPI3 526 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 LRP3O75074 770 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 SEMA7AO75326 666 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 CD70P32970 193 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 RPL29P47914 159 aaKnown RBP10.63□□□□□ -0.71
VPS13A-205ENST00000376636 ZBTB37Q5TC79 503 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 AGBL5Q8NDL9 886 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 ADGRG7Q96K78 797 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 MRPL13Q9BYD1 178 aaKnown RBP10.63□□□□□ -0.71
VPS13A-205ENST00000376636 MRPS2Q9Y399 296 aaKnown RBP10.63□□□□□ -0.71
VPS13A-205ENST00000376636 KIAA1217Q5T5P2 1943 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
VPS13A-205ENST00000376636 B2MP61769 119 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 SYPL1Q16563 259 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 SLC16A12Q6ZSM3 486 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 GABRB1P18505 474 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 PPP1CAP62136 330 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 BHLHE23Q8NDY6 225 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 ASIC5Q9NY37 505 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 LAMB4A4D0S4 1761 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 OR2T8A6NH00 312 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 TNFRSF13CQ96RJ3 184 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 AKAP11Q9UKA4 1901 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 H0YIV9 168 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 SELENOFO60613 162 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 VAMP5O95183 116 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 CYB561P49447 251 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 HTR6P50406 440 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 ZNF687Q8N1G0 1237 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 FYTTD1Q96QD9 318 aaKnown RBP10.63□□□□□ -0.71
VPS13A-205ENST00000376636 NXF2Q9GZY0 626 aaKnown RBP10.63□□□□□ -0.71
VPS13A-205ENST00000376636 SEBOXQ9HB31 216 aaPredicted RBP10.63□□□□□ -0.71
VPS13A-205ENST00000376636 NEURL4Q96JN8 1562 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 ACOT8O14734 319 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 AOAHP28039 575 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 CLEC14AQ86T13 490 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 CSF3RQ99062 836 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM147Q9BVK8 224 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 A0A087X0M5 115 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 A0A1B0GX30 115 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 A0A1W2PNV4 684 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 MIDNQ504T8 468 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 DHRS13Q6UX07 377 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 TXLNGYQ9BZA5 131 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 SULT1A1P50225 295 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 PPP2CBP62714 309 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 PPP1R1CQ8WVI7 109 aa10.63□□□□□ -0.71
VPS13A-205ENST00000376636 TBXA2RP21731 343 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 GLRA1P23415 457 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 RTL10Q7L3V2 364 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM56Q96MV1 263 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 PTDSS2Q9BVG9 487 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 AMDHD2Q9Y303 409 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 CTSLP07711 333 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 ANAPC16Q96DE5 110 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 ZNF778Q96MU6 729 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 IL5P05113 134 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 SDHAP31040 664 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 FAM3AP98173 230 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 CALHM3Q86XJ0 350 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 SLC35B3Q9H1N7 401 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 SLCO3A1Q9UIG8 710 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 TRAV34A0A0B4J273 112 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 RGS13O14921 159 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 NRASP01111 189 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 CLDN20P56880 219 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 SEMA3BQ13214 749 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 OR4C12Q96R67 309 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 MEIKINA0A087WXM9 373 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 CD81P60033 236 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 GABRG1Q8N1C3 465 aa10.62□□□□□ -0.71
VPS13A-205ENST00000376636 PDLIM5Q96HC4 596 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms