RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 AQP3Q92482 292 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 PRRT1Q99946 306 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 DHRS9Q9BPW9 319 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 PBOV1Q9GZY1 135 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 POFUT1Q9H488 388 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 MED29Q9NX70 200 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 KCNN3Q9UGI6 736 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 CYB5R1Q9UHQ9 305 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 USP24Q9UPU5 2620 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 VDAC3Q9Y277 283 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 RHBDD3Q9Y3P4 386 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 WIF1Q9Y5W5 379 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 A0A1W2PQM1 296 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 MEIS3P1A6NDR6 274 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 RFPL4AA6NLU0 287 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 RFPL4AL1F8VTS6 287 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 SYT7O43581 403 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 OR4E1P0C645 316 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 ACSM4P0C7M7 580 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 NR2C1P13056 603 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 TBPP20226 339 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 RAB3AP20336 220 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 CALCRP30988 508 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 H2BFSP57053 126 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 CLRN1P58418 232 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 SRSF4Q08170 494 aaKnown RBP12.4□□□□□ -0.42
HMGCL-203ENST00000374490 BAMBIQ13145 260 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 EIF3IQ13347 325 aaKnown RBP12.4□□□□□ -0.42
HMGCL-203ENST00000374490 HLXQ14774 488 aaPredicted RBP12.4□□□□□ -0.42
HMGCL-203ENST00000374490 ZNF813Q6ZN06 617 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 CHMP1BQ7LBR1 199 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 BPIFB2Q8N4F0 458 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 ZDHHC22Q8N966 263 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 OR5D14Q8NGL3 314 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 OR2AJ1Q8NGZ0 328 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 SCARB1Q8WTV0 552 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 PMEPA1Q969W9 287 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 OR6C1Q96RD1 312 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 WDR77Q9BQA1 342 aaPredicted RBP12.4□□□□□ -0.42
HMGCL-203ENST00000374490 MRPL13Q9BYD1 178 aaKnown RBP12.4□□□□□ -0.42
HMGCL-203ENST00000374490 SLC26A1Q9H2B4 701 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 METTL7AQ9H8H3 244 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 SLC5A6Q9Y289 635 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 B3GALT1Q9Y5Z6 326 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 SESN1Q9Y6P5 492 aa12.4□□□□□ -0.42
HMGCL-203ENST00000374490 FXYD6-FXYD2A0A087WZ82 144 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 SPAARA0A1B0GVQ0 90 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 A0A1B0GW55 424 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 hCG_1807616A0A1W2PRN6 198 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF878C9JN71 531 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 ARPC5O15511 151 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF354AO60765 605 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-203ENST00000374490 TTRP02766 147 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF735P0CB33 412 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 DUX4L2P0CJ85 424 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 DUX4L3P0CJ86 424 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 DUX4L4P0CJ87 422 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 DUX4L5P0CJ88 424 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 DUX4L6P0CJ89 424 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 DUX4L7P0CJ90 424 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 EIF1P41567 113 aaKnown RBP12.39□□□□□ -0.43
HMGCL-203ENST00000374490 MYBPHQ13203 477 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 GK2Q14410 553 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF260Q3ZCT1 412 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 RNASE10Q5GAN6 216 aaKnown RBP12.39□□□□□ -0.43
HMGCL-203ENST00000374490 FAM209AQ5JX71 171 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF529Q6P280 563 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF574Q6ZN55 896 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-203ENST00000374490 C16orf47Q6ZP98 133 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-203ENST00000374490 OR2W3Q7Z3T1 314 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 PIP4P1Q86T03 277 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 DVL3Q92997 716 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-203ENST00000374490 FGGYQ96C11 551 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 CCDC74BQ96LY2 380 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 FXYD6Q9H0Q3 95 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 MYOTQ9UBF9 498 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 DUX4Q9UBX2 424 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 POLR1DQ9Y2S0 133 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 MSRB2Q9Y3D2 182 aa12.39□□□□□ -0.43
HMGCL-203ENST00000374490 IGKV1D-43A0A0B4J1Z2 117 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 IGHV5-10-1A0A0J9YXX1 117 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 LOC102725191A0A1B0GVB3 256 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 B8ZZF3 427 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 CHRM2P08172 466 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF20P17024 532 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 ADH6P28332 368 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 GNALP38405 381 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 PTGDSP41222 190 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 KCNMB1Q16558 191 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 ZNF385CQ66K41 422 aaPredicted RBP12.38□□□□□ -0.43
HMGCL-203ENST00000374490 LIN54Q6MZP7 749 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 FAHD2BQ6P2I3 314 aaPredicted RBP12.38□□□□□ -0.43
HMGCL-203ENST00000374490 TMPRSS9Q7Z410 1059 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 GALNT16Q8N428 558 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 OR2M3Q8NG83 312 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 OR4D6Q8NGJ1 314 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 OR6X1Q8NH79 312 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 POC1BQ8TC44 478 aa12.38□□□□□ -0.43
HMGCL-203ENST00000374490 THAP3Q8WTV1 239 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms