RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 A0A0J9YW62 118 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 PLSCR5A0PG75 271 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 SMIM30A4D0T7 59 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 SLC22A31A6NKX4 558 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 MPTX1A8MV57 137 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 PRR23D1E9PI22 279 aaPredicted RBP13.14□□□□□ -0.31
LMO4-201ENST00000370542 NPIPB9F8W1W9 429 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 ETV2O00321 342 aaPredicted RBP13.14□□□□□ -0.31
LMO4-201ENST00000370542 EIF1AYO14602 144 aaKnown RBP13.14□□□□□ -0.31
LMO4-201ENST00000370542 PDCD5O14737 125 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 KLF4O43474 513 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 GATBO75879 557 aaKnown RBP13.14□□□□□ -0.31
LMO4-201ENST00000370542 NCR1O76036 304 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 OR5F1O95221 314 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 THBDP07204 575 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 FGF2P09038 288 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 PRR23D2P0DMB1 279 aaPredicted RBP13.14□□□□□ -0.31
LMO4-201ENST00000370542 RAB3BP20337 219 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 PSMB1P20618 241 aaKnown RBP13.14□□□□□ -0.31
LMO4-201ENST00000370542 ADH6P28332 368 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 EIF1AXP47813 144 aaKnown RBP13.14□□□□□ -0.31
LMO4-201ENST00000370542 MAP2K6P52564 334 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 SCRN3Q0VDG4 424 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 CD226Q15762 336 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 ACKR1Q16570 336 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 SGCBQ16585 318 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 KLHL26Q53HC5 615 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 STAC2Q6ZMT1 411 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 PXKQ7Z7A4 578 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 OR56A1Q8NGH5 318 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 OR4D11Q8NGI4 311 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 OR5W2Q8NH69 310 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 OR2V1Q8NHB1 315 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 C20orf85Q9H1P6 137 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 OR51I1Q9H343 314 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 ING1Q9UK53 422 aaPredicted RBP13.14□□□□□ -0.31
LMO4-201ENST00000370542 SPATA2Q9UM82 520 aa13.14□□□□□ -0.31
LMO4-201ENST00000370542 A0A087WUU8 490 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 DAPL1A0PJW8 107 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 SCDO00767 359 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 LANCL1O43813 399 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 EFNA2O43921 213 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 OR2A4O95047 310 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 APOL3O95236 402 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 NTN1O95631 604 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 TFP02787 698 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 OR12D1P0DN82 309 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 PAX1P15863 534 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 CXCL3P19876 107 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 ENPP1P22413 925 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 NFYAP23511 347 aaPredicted RBP13.13□□□□□ -0.31
LMO4-201ENST00000370542 EIF1P41567 113 aaKnown RBP13.13□□□□□ -0.31
LMO4-201ENST00000370542 GMFBP60983 142 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 B2MP61769 119 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 UBE2NLQ5JXB2 153 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 OLFML2AQ68BL7 652 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 C20orf204Q6ZNR8 217 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 MEPCEQ7L2J0 689 aaKnown RBP13.13□□□□□ -0.31
LMO4-201ENST00000370542 ZNF550Q7Z398 422 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 PDZD9Q8IXQ8 264 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 CCDC36Q8IYA8 594 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 LINC00518Q8N0U6 118 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 COX18Q8N8Q8 333 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 ZFP41Q8N8Y5 198 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 ABHD1Q96SE0 405 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 ALG8Q9BVK2 526 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 ZNF416Q9BWM5 594 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 ACTRT3Q9BYD9 372 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 ZCCHC3Q9NUD5 404 aaKnown RBP13.13□□□□□ -0.31
LMO4-201ENST00000370542 MCTS1Q9ULC4 181 aaKnown RBP13.13□□□□□ -0.31
LMO4-201ENST00000370542 ICAM5Q9UMF0 924 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 EMC9Q9Y3B6 208 aa13.13□□□□□ -0.31
LMO4-201ENST00000370542 SHISA3A0PJX4 238 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 CXCL13O43927 109 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 CREBL2O60519 120 aaPredicted RBP13.12□□□□□ -0.31
LMO4-201ENST00000370542 AGR2O95994 175 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 PRKAR1BP31321 381 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 S100A11P31949 105 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 MNDAP41218 407 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 OMPP47874 163 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 ZNF41P51814 821 aaPredicted RBP13.12□□□□□ -0.31
LMO4-201ENST00000370542 SUMO3P55854 103 aaPredicted RBP13.12□□□□□ -0.31
LMO4-201ENST00000370542 ZNF117Q03924 483 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 BTN1A1Q13410 526 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 LASP1Q14847 261 aaKnown RBP13.12□□□□□ -0.31
LMO4-201ENST00000370542 MPPED2Q15777 294 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 SLC25A53Q5H9E4 307 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 BEND4Q6ZU67 534 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 MBOAT2Q6ZWT7 520 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 RNF113BQ8IZP6 322 aaKnown RBP13.12□□□□□ -0.31
LMO4-201ENST00000370542 GATSQ8NAP1 163 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 OR4F15Q8NGB8 312 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 OR52L1Q8NGH7 329 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 OR52H1Q8NGJ2 320 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 MOSPD2Q8NHP6 518 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 ABHD4Q8TB40 342 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 CDS1Q92903 461 aa13.12□□□□□ -0.31
LMO4-201ENST00000370542 PIK3IP1Q96FE7 263 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms