RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 C5orf63A6NC05 138 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 B4DSR2 109 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 CLDN25C9JDP6 229 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 TPD52L2O43399 206 aaKnown RBP17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 GLCEO94923 617 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 DAPP51397 102 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 TPTEP56180 551 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 ATP6AP1Q15904 470 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 AVPI1Q5T686 147 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 ASRGL1Q7L266 308 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 PARP8Q8N3A8 854 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 OR2Z1Q8NG97 314 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 DNAJC9Q8WXX5 260 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 CCL17Q92583 94 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 SIGLEC11Q96RL6 698 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 NARFLQ9H6Q4 476 aa17.35■□□□□ 0.37
SMNDC1-201ENST00000369592 MLNRO43193 412 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 LCATP04180 440 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 HMGN1P05114 100 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 THBS2P35442 1172 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 MVKQ03426 396 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 CR1LQ2VPA4 569 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 SNAI3Q3KNW1 292 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 DRAM2Q6UX65 266 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 OR5AS1Q8N127 324 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 OR13G1Q8NGZ3 307 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 ITLN1Q8WWA0 313 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 SPTSSAQ969W0 71 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 SLAMF6Q96DU3 332 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 BEX2Q9BXY8 128 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 SHARPINQ9H0F6 387 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 ZNF556Q9HAH1 456 aa17.34■□□□□ 0.37
SMNDC1-201ENST00000369592 RNF212BA8MTL3 300 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 IGHV2-70P01814 119 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 IGHV2-5P01817 119 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 SPARCP09486 303 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 SLC2A5P22732 501 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 POU1F1P28069 291 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 GSTT1P30711 240 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 RBMXP38159 391 aaKnown RBP17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 SLC3A1Q07837 685 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 RHOUQ7L0Q8 258 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 PRSS45Q7RTY3 260 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 ATG16L2Q8NAA4 619 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 OR6K6Q8NGW6 343 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 OR5K1Q8NHB7 308 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 RNF133Q8WVZ7 376 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 RAB1CQ92928 201 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 ZNF582Q96NG8 517 aaPredicted RBP17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 OR2V2Q96R30 315 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 KCNJ15Q99712 375 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 ZNF665Q9H7R5 613 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 TMEM106BQ9NUM4 274 aa17.33■□□□□ 0.36
SMNDC1-201ENST00000369592 H0YL77 283 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 MSMBP08118 114 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 SELEP16581 610 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 TNFRSF1AP19438 455 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 TNFSF4P23510 183 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 CRISP1P54107 249 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 ZNF92Q03936 586 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 TMEM236Q5W0B7 351 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 PLBD1Q6P4A8 553 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 DPY19L4Q7Z388 723 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 TIMD4Q96H15 378 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 MEGF10Q96KG7 1140 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 INTS14Q96SY0 518 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 AMELYQ99218 206 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 ABHD6Q9BV23 337 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 GCM1Q9NP62 436 aa17.32■□□□□ 0.36
SMNDC1-201ENST00000369592 ZNF878C9JN71 531 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 PRODHO43272 600 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 PRSS12P56730 875 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 EFNB1P98172 346 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 CPOQ8IVL8 374 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 PHC2Q8IXK0 858 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 SPSB4Q96A44 273 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 TMEM186Q96B77 213 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 GABARAPL1Q9H0R8 117 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 PAPOLBQ9NRJ5 636 aaKnown RBP17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 TMEFF2Q9UIK5 374 aaPredicted RBP17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 AP4S1Q9Y587 144 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 NPTNQ9Y639 398 aa17.31■□□□□ 0.36
SMNDC1-201ENST00000369592 PRR23D1E9PI22 279 aaPredicted RBP17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 PRR23D2P0DMB1 279 aaPredicted RBP17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 PAICSP22234 425 aaKnown RBP17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 OPRL1P41146 370 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 GATA4P43694 442 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 PRKXP51817 358 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 MALLQ13021 153 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 SLC35D3Q5M8T2 416 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 GLYATL3Q5SZD4 288 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 C1orf146Q5VVC0 180 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 KDM4DQ6B0I6 523 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 IL17RELQ6ZVW7 336 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 SHFQ7M4L6 423 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 ERI1Q8IV48 349 aaKnown RBP17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 BBS1Q8NFJ9 593 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 OR10AD1Q8NGE0 317 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 COPS4Q9BT78 406 aa17.3■□□□□ 0.36
SMNDC1-201ENST00000369592 OR51V1Q9H2C8 321 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms