RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ASCL1P50553 236 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 RIDAP52758 137 aaKnown RBP7.69□□□□□ -1.18
SNX27-201ENST00000368838 SCAND1P57086 179 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 SRYQ05066 204 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 FMODQ06828 376 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 CAMK2DQ13557 499 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 MEP1BQ16820 701 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 ZNF829Q3KNS6 432 aaPredicted RBP7.69□□□□□ -1.18
SNX27-201ENST00000368838 KRTAP27-1Q3LI81 207 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 ZNF404Q494X3 552 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 ZNF704Q6ZNC4 412 aaPredicted RBP7.69□□□□□ -1.18
SNX27-201ENST00000368838 Q71RC1 249 aaPredicted RBP7.69□□□□□ -1.18
SNX27-201ENST00000368838 ABHD12BQ7Z5M8 362 aaPredicted RBP7.69□□□□□ -1.18
SNX27-201ENST00000368838 CCDC36Q8IYA8 594 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 SYT14Q8NB59 555 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 GJC3Q8NFK1 279 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 OR10H5Q8NGA6 315 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 OR6N1Q8NGY5 312 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 TBC1D15Q8TC07 691 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 S100ZQ8WXG8 99 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 ACOT12Q8WYK0 555 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 C4orf45Q96LM5 186 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 CMTM3Q96MX0 182 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 CHCHD6Q9BRQ6 235 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 SLCO5A1Q9H2Y9 848 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 ACOXLQ9NUZ1 547 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 TMEM38BQ9NVV0 291 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 KLHDC2Q9Y2U9 406 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 LHFPL6Q9Y693 200 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 R4GMQ9 66 aa7.69□□□□□ -1.18
SNX27-201ENST00000368838 ABCA2Q9BZC7 2435 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 TRBV2A0A0J9YWF9 115 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 TVP23AA6NH52 213 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 A6NNC1 897 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 H0YC42 278 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 MRPL33O75394 65 aaKnown RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 SERPINI2O75830 405 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 TPPPO94811 219 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 ZFPL1O95159 310 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 HLA-DQA2P01906 255 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 GSTP1P09211 210 aaKnown RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 CD8BP10966 210 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 CEACAM8P31997 349 aaPredicted RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 NTF4P34130 210 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 RORCP51449 518 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 PSMD7P51665 324 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 PCBD1P61457 104 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 RPS25P62851 125 aaKnown RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 GRB2P62993 217 aaKnown RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 SCRN3Q0VDG4 424 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 FOXF2Q12947 444 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 Q499Y3 187 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 TP53I3Q53FA7 332 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 ZMAT1Q5H9K5 638 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 TMEM244Q5VVB8 128 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 LYPD4Q6UWN0 246 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 CHMP1BQ7LBR1 199 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 KRT74Q7RTS7 529 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 KRT77Q7Z794 578 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 CATSPERDQ86XM0 798 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 TGIF2LYQ8IUE0 185 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 RFLNBQ8N5W9 214 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 C9orf106Q8NAJ2 232 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 IL17RDQ8NFM7 739 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 OR6Q1Q8NGQ2 317 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 THEM6Q8WUY1 208 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 AP3S1Q92572 193 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 NSMAFQ92636 917 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 RNASE6Q93091 150 aaKnown RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 TRMT61AQ96FX7 289 aaKnown RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 ZNF845Q96IR2 970 aaPredicted RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 WDFY2Q96P53 400 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 TBX5Q99593 518 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 FOXC2Q99958 501 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 ULBP2Q9BZM5 246 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 HDHD2Q9H0R4 259 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 ELOVL3Q9HB03 270 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 PNRC2Q9NPJ4 139 aaKnown RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 SLCO1C1Q9NYB5 712 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 FRRS1LQ9P0K9 344 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 CRNNQ9UBG3 495 aaPredicted RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 ZNF391Q9UJN7 358 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 GNG8Q9UK08 70 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 NOSIPQ9Y314 301 aaKnown RBP7.68□□□□□ -1.18
SNX27-201ENST00000368838 PEX16Q9Y5Y5 336 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 PMF1-BGLAPU3KQ54 211 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 ROS1P08922 2347 aa7.68□□□□□ -1.18
SNX27-201ENST00000368838 FREM1Q5H8C1 2179 aa7.67□□□□□ -1.18
SNX27-201ENST00000368838 TRBV5-7A0A0A0MS05 114 aa7.67□□□□□ -1.18
SNX27-201ENST00000368838 MBD3L4A6NDZ8 208 aaPredicted RBP7.67□□□□□ -1.18
SNX27-201ENST00000368838 MBD3L3A6NE82 208 aaPredicted RBP7.67□□□□□ -1.18
SNX27-201ENST00000368838 TUBAL3A6NHL2 446 aa7.67□□□□□ -1.18
SNX27-201ENST00000368838 MBD3L5A6NJ08 208 aaPredicted RBP7.67□□□□□ -1.18
SNX27-201ENST00000368838 SLC22A20A6NK97 555 aa7.67□□□□□ -1.18
SNX27-201ENST00000368838 DHRS7CA6NNS2 312 aa7.67□□□□□ -1.18
SNX27-201ENST00000368838 FAM171A2A8MVW0 826 aa7.67□□□□□ -1.18
SNX27-201ENST00000368838 ZNF879B4DU55 563 aa7.67□□□□□ -1.18
SNX27-201ENST00000368838 ALX3O95076 343 aa7.67□□□□□ -1.18
SNX27-201ENST00000368838 HTR3BO95264 441 aa7.67□□□□□ -1.18
SNX27-201ENST00000368838 IGLV3-1P01715 115 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms