RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 GSTP1P09211 210 aaKnown RBP12.7□□□□□ -0.38
CD48-201ENST00000368045 PRKACBP22694 351 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 AFF3P51826 1226 aaKnown RBP12.7□□□□□ -0.38
CD48-201ENST00000368045 SQSTM1Q13501 440 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 TUSC1Q2TAM9 212 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 PLPPR5Q32ZL2 321 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 ACTBL2Q562R1 376 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 JMJD6Q6NYC1 403 aaPredicted RBP12.7□□□□□ -0.38
CD48-201ENST00000368045 C16orf47Q6ZP98 133 aaPredicted RBP12.7□□□□□ -0.38
CD48-201ENST00000368045 ACOT7LQ6ZUV0 252 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 PGAP1Q75T13 922 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 SLC25A45Q8N413 288 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 OR4S1Q8NGB4 309 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 OR10S1Q8NGN2 331 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 OR2AJ1Q8NGZ0 328 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 NKD1Q969G9 470 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 NUDT22Q9BRQ3 303 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 KLRF1Q9NZS2 232 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 MYEF2Q9P2K5 600 aaKnown RBP12.7□□□□□ -0.38
CD48-201ENST00000368045 CA14Q9ULX7 337 aa12.7□□□□□ -0.38
CD48-201ENST00000368045 POM121CA8CG34 1229 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 MBTPS2O43462 519 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 GIMD1P0DJR0 217 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 FKBP2P26885 142 aaKnown RBP12.69□□□□□ -0.38
CD48-201ENST00000368045 CASRP41180 1078 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 CLRN1P58418 232 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 MYBPHQ13203 477 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 KCNMB1Q16558 191 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 ZNF239Q16600 458 aaKnown RBP12.69□□□□□ -0.38
CD48-201ENST00000368045 NKPD1Q17RQ9 610 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 C3orf33Q6P1S2 294 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 TMEM71Q6P5X7 295 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 TMEM81Q6P7N7 255 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.69□□□□□ -0.38
CD48-201ENST00000368045 ELP5Q8TE02 316 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 PMEPA1Q969W9 287 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 C1QTNF6Q9BXI9 259 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 CST11Q9H112 138 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 FBXO4Q9UKT5 387 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 B3GALT1Q9Y5Z6 326 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 PCDH15Q96QU1 1955 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 BCAT2O15382 392 aaPredicted RBP12.69□□□□□ -0.38
CD48-201ENST00000368045 ZFAND5O76080 213 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 DUS4LO95620 317 aaKnown RBP12.69□□□□□ -0.38
CD48-201ENST00000368045 ONECUT2O95948 504 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 IFNA6P05013 189 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 CYC1P08574 325 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 PGA4P0DJD7 388 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 PGA3P0DJD8 388 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 NAT1P18440 290 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 ZNF93P35789 620 aaPredicted RBP12.69□□□□□ -0.38
CD48-201ENST00000368045 EMP2P54851 167 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 PPP1R1AQ13522 171 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 AWAT2Q6E213 333 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 SLC25A47Q6Q0C1 308 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 TFAP2EQ6VUC0 442 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 CD163Q86VB7 1156 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 OR13C9Q8NGT0 318 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 OR6X1Q8NH79 312 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 POC1BQ8TC44 478 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 SLC25A43Q8WUT9 341 aaPredicted RBP12.69□□□□□ -0.38
CD48-201ENST00000368045 RELTQ969Z4 430 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 MRGPRFQ96AM1 343 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 VRK1Q99986 396 aaPredicted RBP12.69□□□□□ -0.38
CD48-201ENST00000368045 ZNF230Q9UIE0 474 aaPredicted RBP12.69□□□□□ -0.38
CD48-201ENST00000368045 POLR1DQ9Y2S0 133 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 WIF1Q9Y5W5 379 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 LHFPL6Q9Y693 200 aa12.69□□□□□ -0.38
CD48-201ENST00000368045 H3BML4 177 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 EFNA2O43921 213 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 CSN2P05814 226 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 PNLIPP16233 465 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 CCL1P22362 96 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 HRH1P35367 487 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 DLSTP36957 453 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 P2RY4P51582 365 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 IL13RA1P78552 427 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 TAF13Q15543 124 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 PNLIPRP3Q17RR3 467 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 C17orf107Q6ZR85 190 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 MOB3CQ70IA8 216 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 ANGPTL5Q86XS5 388 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 KCNG3Q8TAE7 436 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 THAP6Q8TBB0 222 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 SLC22A8Q8TCC7 542 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 THAP3Q8WTV1 239 aaPredicted RBP12.68□□□□□ -0.38
CD48-201ENST00000368045 NUDCD2Q8WVJ2 157 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 CMBLQ96DG6 245 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 DMRTA2Q96SC8 542 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 WDR77Q9BQA1 342 aaPredicted RBP12.68□□□□□ -0.38
CD48-201ENST00000368045 EMC6Q9BV81 110 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 DUSP15Q9H1R2 295 aaPredicted RBP12.68□□□□□ -0.38
CD48-201ENST00000368045 LDAHQ9H6V9 325 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 TMEM185BQ9H7F4 350 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 PTGES2Q9H7Z7 377 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 METTL7AQ9H8H3 244 aa12.68□□□□□ -0.38
CD48-201ENST00000368045 ALPK2Q86TB3 2170 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 LOC102725191A0A1B0GVB3 256 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
CD48-201ENST00000368045 EFSO43281 561 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms