RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ELF3P78545 371 aaPredicted RBP11.86□□□□□ -0.51
VAMP4-202ENST00000367740 POU4F2Q12837 409 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 TOP3AQ13472 1001 aaPredicted RBP11.86□□□□□ -0.51
VAMP4-202ENST00000367740 AANATQ16613 207 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 C6orf10Q5SRN2 563 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 BEND6Q5SZJ8 279 aaPredicted RBP11.86□□□□□ -0.51
VAMP4-202ENST00000367740 OR5L1Q8NGL2 311 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 OR6T1Q8NGN1 323 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 PIFOQ8TCI5 191 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 ADAMTS16Q8TE57 1224 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 AENQ8WTP8 325 aaKnown RBP11.86□□□□□ -0.51
VAMP4-202ENST00000367740 ITCHQ96J02 903 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 DMRTB1Q96MA1 342 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 WACQ9BTA9 647 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 CHID1Q9BWS9 393 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 MEGF9Q9H1U4 602 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 TXNIPQ9H3M7 391 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 EVA1AQ9H8M9 152 aa11.86□□□□□ -0.51
VAMP4-202ENST00000367740 ANGPTL7O43827 346 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 PTBP3O95758 552 aaKnown RBP11.85□□□□□ -0.51
VAMP4-202ENST00000367740 LYL1P12980 280 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 AQP1P29972 269 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 CDK6Q00534 326 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 GCNT6Q5T4J0 391 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 GCSAMQ8N6F7 178 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 SDR9C7Q8NEX9 313 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 PFN4Q8NHR9 129 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 APOBEC3DQ96AK3 386 aaPredicted RBP11.85□□□□□ -0.51
VAMP4-202ENST00000367740 MPP4Q96JB8 637 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 RBP7Q96R05 134 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 SORT1Q99523 831 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 PRSS27Q9BQR3 290 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 CPPED1Q9BRF8 314 aaPredicted RBP11.85□□□□□ -0.51
VAMP4-202ENST00000367740 CDCA4Q9BXL8 241 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 PAIP1Q9H074 479 aaKnown RBP11.85□□□□□ -0.51
VAMP4-202ENST00000367740 RMND5AQ9H871 391 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 PPCSQ9HAB8 311 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 RAP2CQ9Y3L5 183 aa11.85□□□□□ -0.51
VAMP4-202ENST00000367740 IGHV3OR15-7A0A075B7D8 119 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 PEX14O75381 377 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 OR7A10O76100 309 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 FUT1P19526 365 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 RPL14P50914 215 aaKnown RBP11.84□□□□□ -0.51
VAMP4-202ENST00000367740 TMEM95Q3KNT9 176 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 TEX36Q5VZQ5 186 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 NCR3LG1Q68D85 454 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 HCP5Q6MZN7 132 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 MSANTD1Q6ZTZ1 278 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 RBM45Q8IUH3 476 aaKnown RBP11.84□□□□□ -0.51
VAMP4-202ENST00000367740 ARMC8Q8IUR7 673 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 LINC00482Q8N8I6 264 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 SMYD1Q8NB12 490 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 OR4D11Q8NGI4 311 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 OR1F12Q8NHA8 337 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 FNDC8Q8TC99 324 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 LRRC8CQ8TDW0 803 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 PKNOX2Q96KN3 472 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 ASCL2Q99929 193 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 GPR61Q9BZJ8 451 aa11.84□□□□□ -0.51
VAMP4-202ENST00000367740 LSM4Q9Y4Z0 139 aaKnown RBP11.84□□□□□ -0.51
VAMP4-202ENST00000367740 TRAPPC13A5PLN9 417 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 SDHDO14521 159 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 MT-ND1P03886 318 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 SERPINE1P05121 402 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 CCDC159P0C7I6 412 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 ABCE1P61221 599 aaKnown RBP11.83□□□□□ -0.52
VAMP4-202ENST00000367740 RPL27P61353 136 aaKnown RBP11.83□□□□□ -0.52
VAMP4-202ENST00000367740 AQP6Q13520 282 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 SCARB2Q14108 478 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 CCDC92Q53HC0 331 aaPredicted RBP11.83□□□□□ -0.52
VAMP4-202ENST00000367740 TCTEX1D4Q5JR98 221 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 OTPQ5XKR4 325 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 Q6ZS46 218 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 ZNF826PQ6ZT77 177 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 FAM216BQ8N7L0 139 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 Q8NFD4 153 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 GPR32P1Q8NGA4 272 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 C8orf46Q8TAG6 207 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 GTF2H4Q92759 462 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 CCL13Q99616 98 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 MUC13Q9H3R2 512 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 PALMDQ9NP74 551 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 C1orf123Q9NWV4 160 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 SLC25A37Q9NYZ2 338 aa11.83□□□□□ -0.52
VAMP4-202ENST00000367740 PRPF19Q9UMS4 504 aaKnown RBP11.83□□□□□ -0.52
VAMP4-202ENST00000367740 H0YHG0 523 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 SLC22A3O75751 556 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 OR8G1Q15617 311 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 DUSP7Q16829 419 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 WHAMMP3Q1A5X7 153 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 WDR38Q5JTN6 314 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 CCDC121Q6ZUS5 278 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 MEPCEQ7L2J0 689 aaKnown RBP11.82□□□□□ -0.52
VAMP4-202ENST00000367740 OR5AU1Q8NGC0 362 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 HCAR1Q9BXC0 346 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 METTL8Q9H825 291 aaKnown RBP11.82□□□□□ -0.52
VAMP4-202ENST00000367740 ATPIF1Q9UII2 106 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 HAO1Q9UJM8 370 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 RYR1P21817 5038 aa11.82□□□□□ -0.52
VAMP4-202ENST00000367740 H7C1C5 153 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms