RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 HSD17B11Q8NBQ5 300 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 DNAJB12Q9NXW2 375 aaKnown RBP10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 PHF1O43189 567 aaPredicted RBP10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 WNT1P04628 370 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 CLDN17P56750 224 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 AGERQ15109 404 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 PCK2Q16822 640 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 ATPAF1Q5TC12 328 aaPredicted RBP10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 SYT9Q86SS6 491 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 BCO1Q9HAY6 547 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 RAB18Q9NP72 206 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 DNAJB11Q9UBS4 358 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF587BE7ETH6 402 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 LGALS8O00214 317 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 OGG1O15527 345 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF79Q15937 498 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 ST7LQ8TDW4 575 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 HDGFL3Q9Y3E1 203 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 FITM1A5D6W6 292 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 ERV3-1Q14264 604 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 RHOUQ7L0Q8 258 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 SSX3Q99909 188 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 HSBP1L1C9JCN9 74 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 GLULP15104 373 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 NARFLQ9H6Q4 476 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 PCDHGA1Q9Y5H4 931 aa10.69□□□□□ -0.7
CDC42BPA-202ENST00000366764 A0A1W2PPV4 95 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 DUS4LO95620 317 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 IFI6P09912 130 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF85Q03923 595 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 DEFB133Q30KQ1 61 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF770Q6IQ21 691 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 DEFB119Q8N690 84 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 AGBL5Q8NDL9 886 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 SEMA6DQ8NFY4 1073 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 STT3BQ8TCJ2 826 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF426Q9BUY5 554 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 RPS2P15880 293 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 MARCH3Q86UD3 253 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF547Q8IVP9 402 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 RNF170Q96K19 258 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 PURGQ9UJV8 347 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 BET1O15155 118 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 MAGEB4O15481 346 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 UBE2IP63279 158 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 MAML2Q8IZL2 1156 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 OR5M1Q8NGP8 315 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 SECTM1Q8WVN6 248 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 SCMH1Q96GD3 660 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 SUCNR1Q9BXA5 334 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 FLVCR2Q9UPI3 526 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 BHLHE40O14503 412 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 SCRG1O75711 98 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 LILRA6Q6PI73 481 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 GLCCI1Q86VQ1 547 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 LSMEM1Q8N8F7 131 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 OR51A4Q8NGJ6 313 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 TAAR8Q969N4 342 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 LEUTXA8MZ59 168 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 CTAG2O75638 210 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.68□□□□□ -0.71e-6■□□□□ 8.8
CDC42BPA-202ENST00000366764 AADACL3Q5VUY0 350 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 AAED1Q7RTV5 226 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 SLC39A9Q9NUM3 307 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 MRPL33O75394 65 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 PSMB3P49720 205 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 PLA1AQ53H76 456 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 OR2G3Q8NGZ4 309 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 SLCO1C1Q9NYB5 712 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 CA5BQ9Y2D0 317 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 LSM2Q9Y333 95 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF354AO60765 605 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 MRPS34P82930 218 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF345Q14585 488 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 FIGNL2A6NMB9 653 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 PTAFRP25105 342 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZNF136P52737 540 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 OR8D4Q8NGM9 314 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 NUDT9Q9BW91 350 aa10.68□□□□□ -0.7
CDC42BPA-202ENST00000366764 TCF20Q9UGU0 1960 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 PRAMEF4O60810 478 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 HTD2P86397 168 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 OR5M8Q8NGP6 311 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 C4orf45Q96LM5 186 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 SIGLEC11Q96RL6 698 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 PLA2G10O15496 165 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 ITGBL1O95965 494 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 HLA-DQB1P01920 261 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 RBP2P50120 134 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 IFITM3Q01628 133 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 FZD2Q14332 565 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 SSX2Q16385 188 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 MSI2Q96DH6 328 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 C20orf141Q9NUB4 165 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 COL4A5P29400 1685 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 BCAT2O15382 392 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 LILRB5O75023 590 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 ZFP36L2P47974 494 aaKnown RBP10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 IKZF1Q13422 519 aa10.67□□□□□ -0.7
CDC42BPA-202ENST00000366764 SURF2Q15527 256 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms