RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ZER1Q7Z7L7 766 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 P2RY8Q86VZ1 359 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 WDFY1Q8IWB7 410 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 RNF113BQ8IZP6 322 aaKnown RBP6.73□□□□□ -1.33
YBX3-204ENST00000366290 STEAP2Q8NFT2 490 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 SLC25A36Q96CQ1 311 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 ZHX1-C8orf76Q96EF9 292 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 EPYCQ99645 322 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 TMEM204Q9BSN7 226 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 SF3B5Q9BWJ5 86 aaKnown RBP6.73□□□□□ -1.33
YBX3-204ENST00000366290 KLHL4Q9C0H6 718 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 ACTR6Q9GZN1 396 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 LIME1Q9H400 295 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 FKRPQ9H9S5 495 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 MRPL39Q9NYK5 338 aaKnown RBP6.73□□□□□ -1.33
YBX3-204ENST00000366290 MALT1Q9UDY8 824 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 MED31Q9Y3C7 131 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 TNFRSF18Q9Y5U5 241 aa6.73□□□□□ -1.33
YBX3-204ENST00000366290 HEATR1Q9H583 2144 aaKnown RBP6.73□□□□□ -1.33
YBX3-204ENST00000366290 DNHD1Q96M86 4753 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 INAFM1C9JVW0 142 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 PDLIM1O00151 329 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 TNFRSF11BO00300 401 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 PLPP3O14495 311 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 CLOCKO15516 846 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 OR2T1O43869 369 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 KRT36O76013 467 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 VAMP5O95183 116 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 TOMM40O96008 361 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 MT-ATP6P00846 226 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 CST1P01037 141 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 RAF1P04049 648 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 IFI30P13284 250 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 HOXB6P17509 224 aaKnown RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 EDNRAP25101 427 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 IFNA8P32881 189 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 GPR4P46093 362 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 GSSP48637 474 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 NUDT6P53370 316 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 SMIM11AP58511 58 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 FXYD6P3P58550 94 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 RPS4XP62701 263 aaKnown RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 ROR2Q01974 943 aaKnown RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 IRF3Q14653 427 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 SLC17A1Q14916 467 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 ATP6AP1Q15904 470 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 MS4A18Q3C1V0 323 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 BEX5Q5H9J7 111 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 OTUD3Q5T2D3 398 aaPredicted RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 FBXW9Q5XUX1 488 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 PQLC2Q6ZP29 291 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 TMPRSS11FQ6ZWK6 438 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 HS3ST5Q8IZT8 346 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 KDM8Q8N371 416 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 ZIC4Q8N9L1 334 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 LRRC75AQ8NAA5 344 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 OR4K5Q8NGD3 323 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 OR9Q2Q8NGE9 314 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 HSD17B8Q92506 261 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 TMEM45BQ96B21 275 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 S100PBPQ96BU1 408 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 BPIFA2Q96DR5 249 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 SGTBQ96EQ0 304 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 RRNAD1Q96FB5 475 aaKnown RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 PGAM5Q96HS1 289 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 NAA11Q9BSU3 229 aaPredicted RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 TAPBPLQ9BX59 468 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 REEP1Q9H902 201 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 S100A14Q9HCY8 104 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 HINT3Q9NQE9 182 aaKnown RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 TAS2R5Q9NYW4 299 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 C6orf203Q9P0P8 240 aaPredicted RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 DNAJB9Q9UBS3 223 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 ZNF229Q9UJW7 825 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 PAM16Q9Y3D7 125 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 SAMHD1Q9Y3Z3 626 aaKnown RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 AP4S1Q9Y587 144 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 MAGED1Q9Y5V3 778 aaPredicted RBP6.72□□□□□ -1.33
YBX3-204ENST00000366290 FLVCR1Q9Y5Y0 555 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 U3KQV3 271 aa6.72□□□□□ -1.33
YBX3-204ENST00000366290 CSPG4Q6UVK1 2322 aa6.71□□□□□ -1.33
YBX3-204ENST00000366290 NSD1Q96L73 2696 aaPredicted RBP6.71□□□□□ -1.34
YBX3-204ENST00000366290 IGHV4-28A0A0C4DH34 117 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 LOC102725191A0A1B0GVB3 256 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 HTR3EA5X5Y0 456 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 WNT9BO14905 357 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 TRAF3IP2O43734 574 aaPredicted RBP6.71□□□□□ -1.34
YBX3-204ENST00000366290 TMCC2O75069 709 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 HLA-DOBP13765 273 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 GABRB1P18505 474 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 DNASE1P24855 282 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 ART1P52961 327 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 RPL18Q07020 188 aaKnown RBP6.71□□□□□ -1.34
YBX3-204ENST00000366290 ZP4Q12836 540 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 GK3PQ14409 553 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 TAB1Q15750 504 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 ADIPOQQ15848 244 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 DEFB113Q30KQ7 82 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 TIMM23BQ5SRD1 257 aa6.71□□□□□ -1.34
YBX3-204ENST00000366290 ADAM5Q6NVV9 412 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms