RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NT5C3BQ969T7 300 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 ECHDC3Q96DC8 303 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 C18orf15Q96N68 181 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 GPR82Q96P67 336 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 TMEM243Q9BU79 118 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 NACADO15069 1562 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 SORL1Q92673 2214 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 ARPC4-TTLL3A0A0A6YYG9 625 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 IGHV1-69DA0A0B4J2H0 117 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 NCBP2LA6PVI3 153 aaKnown RBP1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 J3QRE1 110 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 K7EMT4 169 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 PFN1P07737 140 aaKnown RBP1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 HRES1P13985 223 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 NCF2P19878 526 aaPredicted RBP1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 FOXN2P32314 431 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 CDH6P55285 790 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 IHHQ14623 411 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 MRPL23Q16540 153 aaKnown RBP1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 PGGHGQ32M88 737 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 DEFB134Q4QY38 66 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 CASC1Q6TDU7 716 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 NUBPLQ8TB37 319 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 APH1BQ8WW43 257 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 GHSRQ92847 366 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 RNF145Q96MT1 663 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 CRACR2AQ9BSW2 395 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 CHCHD7Q9BUK0 85 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 SLC2A8Q9NY64 477 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 SLC17A7Q9P2U7 560 aa1.74□□□□□ -2.13
RNU4-28P-201ENST00000364739 PCDH11XQ9BZA7 1347 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 OR6C70A6NIJ9 312 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 FLOT1O75955 427 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 BMI1P35226 326 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 TAGLN2P37802 199 aaKnown RBP1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 TALDO1P37837 337 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 IDH2P48735 452 aaKnown RBP1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 TAS2R46P59540 309 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 EIF3EP60228 445 aaKnown RBP1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 SP4Q02446 784 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 MAD2L1BPQ15013 274 aaPredicted RBP1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 SLC25A35Q3KQZ1 300 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 PRSS54Q6PEW0 395 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 TMEM107Q6UX40 140 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 FAM71AQ8IYT1 594 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 CBR4Q8N4T8 237 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 LZTS2Q9BRK4 669 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 SEC22CQ9BRL7 303 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 RACGAP1Q9H0H5 632 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 NEK6Q9HC98 313 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 MYOZ1Q9NP98 299 aaPredicted RBP1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 MED4Q9NPJ6 270 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 FARSAQ9Y285 508 aaKnown RBP1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 COMMD3-BMI1R4GMX3 469 aa1.73□□□□□ -2.13
RNU4-28P-201ENST00000364739 IGKV1-27A0A075B6S5 117 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 LYRM9A8MSI8 78 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 CXCL11O14625 94 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 NMT2O60551 498 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 CLDN11O75508 207 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 RPN2P04844 631 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 PTMAP06454 111 aaKnown RBP1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 SERPINE2P07093 398 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 ASGR1P07306 291 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 ZNF35P13682 527 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 ZNF24P17028 368 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 IL32P24001 234 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 UBE2E1P51965 193 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 ACLYP53396 1101 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 CHRNA6Q15825 494 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 LUZP6Q538Z0 58 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 C1orf185Q5T7R7 199 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 SLC8B1Q6J4K2 584 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 H3F3CQ6NXT2 135 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 SMARCD3Q6STE5 483 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 SNX31Q8N9S9 440 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 OR9K2Q8NGE7 335 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 OR51E1Q8TCB6 317 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 ANKRD60Q9BZ19 345 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 SLIRPQ9GZT3 109 aaKnown RBP1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 CSNK1G1Q9HCP0 422 aa1.72□□□□□ -2.13
RNU4-28P-201ENST00000364739 C2orf16Q68DN1 1984 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 SYCE1LA8MT33 242 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 TNFRSF11BO00300 401 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 SLC2A3P11169 496 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 GALR1P47211 349 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 NDUFA8P51970 172 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 ELF3P78545 371 aaPredicted RBP1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 SEMG2Q02383 582 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 TNFRSF9Q07011 255 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 PPIDQ08752 370 aaKnown RBP1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 PNOCQ13519 176 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 DEGS2Q6QHC5 323 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 CERS6Q6ZMG9 384 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 OR10G6Q8NH81 332 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 KCNG3Q8TAE7 436 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 NUDT9Q9BW91 350 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 METTL7AQ9H8H3 244 aa1.71□□□□□ -2.14
RNU4-28P-201ENST00000364739 XKRY2A2RUG3 117 aa1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 CLOCKO15516 846 aa1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 RAD51CO43502 376 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms