RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 RAC2P15153 192 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 CFL1P23528 166 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 CX3CR1P49238 355 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 CDONQ4KMG0 1287 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 PAMR1Q6UXH9 720 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 RFPL4BQ6ZWI9 263 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 PRSS45Q7RTY3 260 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 FAM220AQ7Z4H9 259 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 SYS1Q8N2H4 156 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 BPIFB6Q8NFQ5 453 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 OR52I1Q8NGK6 324 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 SYNPRQ8TBG9 265 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 IGFBPL1Q8WX77 278 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 GGHQ92820 318 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 TMEM80Q96HE8 168 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 LURAP1Q96LR2 239 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 PLK3Q9H4B4 646 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 FKBP14Q9NWM8 211 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 CHCHD3Q9NX63 227 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 CGGBP1Q9UFW8 167 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 MRM2Q9UI43 246 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 GPR160Q9UJ42 338 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 IKZF2Q9UKS7 526 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 BLOC1S6Q9UL45 172 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 MYRFQ9Y2G1 1151 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 STARD10Q9Y365 291 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 EXOSC1Q9Y3B2 195 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 TPRKBQ9Y3C4 175 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 ITPR2Q14571 2701 aa11.89□□□□□ -0.51
NSMCE1-201ENST00000361439 TMEM269A0A1B0GVZ9 245 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 SLC1A7O00341 560 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 XRCC2O43543 280 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 FAM20BO75063 409 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 APOL3O95236 402 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 IGHV3-13P01766 116 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 RAF1P04049 648 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 SELEP16581 610 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 MYL12AP19105 171 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 LIPAP38571 399 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 PRKXP51817 358 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 KLF3P57682 345 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 ZNF121P58317 390 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 ZNF85Q03923 595 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 ST3GAL4Q11206 333 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 SWI5Q1ZZU3 235 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 RBM48Q5RL73 367 aaKnown RBP11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 RNLSQ5VYX0 342 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 VHLLQ6RSH7 139 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 SPATC1Q76KD6 591 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 ZNF540Q8NDQ6 660 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 SLC25A40Q8TBP6 338 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 KLF14Q8TD94 323 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 MYDGFQ969H8 173 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 SPSB4Q96A44 273 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 HAVCR1Q96D42 359 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 CNBD2Q96M20 576 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 TBX5Q99593 518 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 TRAF4Q9BUZ4 470 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 YTHDF1Q9BYJ9 559 aaKnown RBP11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 OR2J1Q9GZK6 312 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 OR10A2Q9H208 303 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 CXorf56Q9H5V9 222 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 FAM206AQ9NX38 181 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 ERVK13-1Q9NX77 482 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 PMF1-BGLAPU3KQ54 211 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 NAV2Q8IVL1 2488 aa11.88□□□□□ -0.51
NSMCE1-201ENST00000361439 A0A0U1RQV5 110 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 PRR32B1ATL7 298 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 ANXA2P07355 339 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 PAX1P15863 534 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 KITLGP21583 273 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 KRTAP10-9P60411 292 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 SNRPD2P62316 118 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 MST1LQ2TV78 715 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 LIPNQ5VXI9 398 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 C11orf71Q6IPW1 123 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 TMPRSS11AQ6ZMR5 421 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 SSX6Q7RTT6 188 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 STX19Q8N4C7 294 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 RFLNBQ8N5W9 214 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 YIPF7Q8N8F6 280 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 MBD6Q96DN6 1003 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 CCL19Q99731 98 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 ZNF649Q9BS31 505 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 ALG8Q9BVK2 526 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 MRPL37Q9BZE1 423 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 CYSLTR2Q9NS75 346 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 NUFIP1Q9UHK0 495 aaKnown RBP11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 ST6GALNAC2Q9UJ37 374 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 LAMP3Q9UQV4 416 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 CAB39Q9Y376 341 aaPredicted RBP11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 LRRC42Q9Y546 428 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 SNX5Q9Y5X3 404 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 R4GMQ9 66 aa11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 RAI1Q7Z5J4 1906 aaPredicted RBP11.87□□□□□ -0.51
NSMCE1-201ENST00000361439 NOTCH2Q04721 2471 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 OVOL3O00110 214 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 XPNPEP2O43895 674 aa11.86□□□□□ -0.51
NSMCE1-201ENST00000361439 SRSF10O75494 262 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms