RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 RGS6P49758 472 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 NR1H2P55055 460 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 UCP2P55851 309 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 WNT4P56705 351 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF121P58317 390 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 EMX1Q04741 257 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 MRPL28Q13084 256 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF829Q3KNS6 432 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 ARL9Q6T311 187 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 FAM220AQ7Z4H9 259 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 TSPAN14Q8NG11 270 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 HAVCR2Q8TDQ0 301 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 GATAD2BQ8WXI9 593 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 RADILQ96JH8 1075 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 KCNS3Q9BQ31 491 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 TMEM204Q9BSN7 226 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 MND1Q9BWT6 205 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 EIF3KQ9UBQ5 218 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 LSM2Q9Y333 95 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 SNX5Q9Y5X3 404 aa10.71□□□□□ -0.69
NIF3L1-201ENST00000359683 CRYBG3Q68DQ2 2970 aa10.71□□□□□ -0.7
NIF3L1-201ENST00000359683 CENPEQ02224 2701 aa10.71□□□□□ -0.7
NIF3L1-201ENST00000359683 PKDREJQ9NTG1 2253 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 FAM221AA4D161 298 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 TRIM64CA6NLI5 447 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 E9PI62 339 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 J3QW42 95 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 RPP14O95059 124 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 GOSR1O95249 250 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 NGFP01138 241 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 CD3EP07766 207 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 PCMT1P22061 227 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 NR4A1P22736 598 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 MAP2K4P45985 399 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 SLC6A9P48067 706 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 GBX2P52951 348 aaPredicted RBP10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 NKX6-1P78426 367 aaPredicted RBP10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 SPOCK1Q08629 439 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 ACSM1Q08AH1 577 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 DOC2BQ14184 412 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 TBCEQ15813 527 aaPredicted RBP10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 C1orf174Q8IYL3 243 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 ZNF101Q8IZC7 436 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 SVOPQ8N4V2 548 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 APOBEC3DQ96AK3 386 aaPredicted RBP10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 OR5M11Q96RB7 305 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 SP140LQ9H930 580 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 ACOT13Q9NPJ3 140 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 G6PC2Q9NQR9 355 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 SPEF1Q9Y4P9 236 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 ABCA4P78363 2273 aa10.7□□□□□ -0.7
NIF3L1-201ENST00000359683 A0A087WXM4 84 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 A6NNC1 897 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 SHISA9B4DS77 424 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 ATP6V1G2-DDX39BF2Z307 99 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 LOC110117498-PIK3R3F6TDL0 507 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 SMPD2O60906 423 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 LALBAP00709 142 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 LCATP04180 440 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 ANXA2P07355 339 aaKnown RBP10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 SLC2A1P11166 492 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 ANOS1P23352 680 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 PSMB10P40306 273 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 RAD52P43351 418 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 TGM4P49221 684 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 MFGE8Q08431 387 aaPredicted RBP10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 SPHARQ15513 63 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 CCDC58Q4VC31 144 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 CATSPERDQ86XM0 798 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 KLBQ86Z14 1044 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 NUP37Q8NFH4 326 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 OR52H1Q8NGJ2 320 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 OR2G2Q8NGZ5 317 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 PPP1R14AQ96A00 147 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 PIK3IP1Q96FE7 263 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 ZNF319Q9P2F9 582 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 OR52A1Q9UKL2 312 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 STARD10Q9Y365 291 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 RNF115Q9Y4L5 304 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 C5orf63A6NC05 138 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 MAGEA13PA6NCF6 341 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 OGG1O15527 345 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 FAM157BP0CG42 384 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 TUBG1P23258 451 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 GLRXP35754 106 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 CCR9P51686 369 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 GTF2A1P52655 376 aaPredicted RBP10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 NANOS3P60323 173 aaKnown RBP10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 ALKBH1Q13686 389 aaKnown RBP10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 SNAI3Q3KNW1 292 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 XAF1Q6GPH4 301 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 RPL22L1Q6P5R6 122 aaKnown RBP10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 SLC22A25Q6T423 547 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 UNQ6126/PRO20091Q6UXV3 157 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 RFPL4BQ6ZWI9 263 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 FAM57BQ71RH2 274 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 ELMOD2Q8IZ81 293 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 PRSS35Q8N3Z0 413 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 OR5L1Q8NGL2 311 aa10.69□□□□□ -0.7
NIF3L1-201ENST00000359683 ABHD4Q8TB40 342 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms