RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 RBP2P50120 134 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 SRSF5Q13243 272 aaKnown RBP13.36□□□□□ -0.27
UBAP1-202ENST00000359544 GPR18Q14330 331 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 ZNF239Q16600 458 aaKnown RBP13.36□□□□□ -0.27
UBAP1-202ENST00000359544 TMEM128Q5BJH2 165 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 EMC4Q5J8M3 183 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 PYY3Q5JQD4 70 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 TBC1D3CQ6IPX1 549 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 MAMDC2Q7Z304 686 aaPredicted RBP13.36□□□□□ -0.27
UBAP1-202ENST00000359544 MDGA2Q7Z553 956 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 TBC1D3Q8IZP1 549 aaPredicted RBP13.36□□□□□ -0.27
UBAP1-202ENST00000359544 ZNF383Q8NA42 475 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 SLAMF9Q96A28 289 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 HIF3AQ9Y2N7 669 aa13.36□□□□□ -0.27
UBAP1-202ENST00000359544 CFAP54Q96N23 3096 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 C4orf47A7E2U8 309 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 GPR89AB7ZAQ6 455 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 KLF8O95600 359 aaPredicted RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 RENP00797 406 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 CST4P01036 141 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 GPR89BP0CG08 455 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 ZNF10P21506 573 aaPredicted RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 HRH1P35367 487 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 SULT1A1P50225 295 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 CTXN1P60606 82 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 RUNX2Q13950 521 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 ZNF260Q3ZCT1 412 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 ALG10Q5BKT4 473 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 RPL7L1Q6DKI1 246 aaKnown RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 ASPHD2Q6ICH7 369 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 OR10H5Q8NGA6 315 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 ZNF563Q8TA94 476 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 WFIKKN2Q8TEU8 576 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 RSC1A1Q92681 617 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 C14orf144Q96I85 54 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 IP6K3Q96PC2 410 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 TAS2R4Q9NYW5 299 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 KCNK6Q9Y257 313 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 MRPS18BQ9Y676 258 aaKnown RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 LY86O95711 162 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 TXNDC12O95881 172 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 OR8U9P0C7N5 309 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 IGFBP3P17936 291 aaPredicted RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 KIR2DL1P43626 348 aaPredicted RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 EBPQ15125 230 aaKnown RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 CACUL1Q86Y37 369 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 ACBD4Q8NC06 268 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 OR8U1Q8NH10 309 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 OR8B4Q96RC9 309 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 S100A13Q99584 98 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 NKX3-1Q99801 234 aaPredicted RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 CHST5Q9GZS9 411 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 ELOVL3Q9HB03 270 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 PARPBPQ9NWS1 579 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 GAR1Q9NY12 217 aaKnown RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 GRHPRQ9UBQ7 328 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 CGGBP1Q9UFW8 167 aaPredicted RBP13.35□□□□□ -0.27
UBAP1-202ENST00000359544 GTF2A1LQ9UNN4 478 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 STARD10Q9Y365 291 aa13.35□□□□□ -0.27
UBAP1-202ENST00000359544 SDK1Q7Z5N4 2213 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 A0A1B0GV90 55 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 URADA6NGE7 173 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 TSPAN15O95858 294 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 KIAA0141Q14154 515 aaPredicted RBP13.34□□□□□ -0.27
UBAP1-202ENST00000359544 SLC17A1Q14916 467 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 PRICKLE4Q2TBC4 344 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 DEFB134Q4QY38 66 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 DNLZQ5SXM8 178 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 TMEM92Q6UXU6 159 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 ZNF565Q8N9K5 539 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 OTOSQ8NHW6 89 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 ZCCHC10Q8TBK6 192 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 SPACA1Q9HBV2 294 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 DCAF16Q9NXF7 216 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 RAB22AQ9UL26 194 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 COLEC10Q9Y6Z7 277 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 SPACA6W5XKT8 324 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 PRAMEF26H0Y7S4 382 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 DCTN6O00399 190 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 SLC31A2O15432 143 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 IFNA10P01566 189 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 SLC2A1P11166 492 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 ACTR1BP42025 376 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 CXCL12P48061 93 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 RIDAP52758 137 aaKnown RBP13.34□□□□□ -0.27
UBAP1-202ENST00000359544 TMEM268Q5VZI3 342 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 BEND4Q6ZU67 534 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 RNF44Q7L0R7 432 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 HOGA1Q86XE5 327 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 JAGN1Q8N5M9 183 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 C10orf53Q8N6V4 93 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 LRRC75AQ8NAA5 344 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 MARCH1Q8TCQ1 289 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 ASB5Q8WWX0 329 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 FAM46BQ96A09 425 aa13.34□□□□□ -0.27
UBAP1-202ENST00000359544 CCNL2Q96S94 520 aaPredicted RBP13.34□□□□□ -0.27
UBAP1-202ENST00000359544 DNAH14Q0VDD8 3507 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 EML5Q05BV3 1969 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 A0A0A6YYC8 382 aaPredicted RBP13.33□□□□□ -0.28
UBAP1-202ENST00000359544 I3L1I5 382 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms