RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 NKX1-2Q9UD57 310 aaPredicted RBP8.03□□□□□ -1.12
UPF2-202ENST00000357604 SLC22A13Q9Y226 551 aa8.03□□□□□ -1.12
UPF2-202ENST00000357604 A0A1W2PQ09 198 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 SH2D1BO14796 132 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 ATF1P18846 271 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 FAUP35544 74 aaKnown RBP8.02□□□□□ -1.12
UPF2-202ENST00000357604 PSMB10P40306 273 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 RORCP51449 518 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 SLC26A10Q8NG04 563 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 TFAP2CQ92754 450 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 RTN4RQ9BZR6 473 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 BATF3Q9NR55 127 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 RNF7Q9UBF6 113 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 LRP12Q9Y561 859 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 FAM215AQ9Y5M1 114 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 CACNA1EQ15878 2313 aa8.02□□□□□ -1.12
UPF2-202ENST00000357604 ASCC3Q8N3C0 2202 aaKnown RBP8.02□□□□□ -1.13
UPF2-202ENST00000357604 CENPXA8MT69 81 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 RGS5O15539 181 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 NCR1O76036 304 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 CD3GP09693 182 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 GNG3P63215 75 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 PSG4Q00888 419 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 ESCO2Q56NI9 601 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 DMRTC2Q8IXT2 367 aaPredicted RBP8.02□□□□□ -1.13
UPF2-202ENST00000357604 SHISA5Q8N114 240 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 OR51E1Q8TCB6 317 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 GGHQ92820 318 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 EMG1Q92979 244 aaKnown RBP8.02□□□□□ -1.13
UPF2-202ENST00000357604 DNTTIP1Q9H147 329 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 ZNF442Q9H7R0 627 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 ISYNA1Q9NPH2 558 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 ERVK13-1Q9NX77 482 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 MGAT4AQ9UM21 535 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 LAMP3Q9UQV4 416 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 A0A1W2PQL4 384 aaPredicted RBP8.02□□□□□ -1.13
UPF2-202ENST00000357604 DHRS3O75911 302 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 MLLT11Q13015 90 aaPredicted RBP8.02□□□□□ -1.13
UPF2-202ENST00000357604 GPR50Q13585 617 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 ZNF672Q499Z4 452 aaPredicted RBP8.02□□□□□ -1.13
UPF2-202ENST00000357604 SLC25A30Q5SVS4 291 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 SPATA46Q5T0L3 261 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 RHOUQ7L0Q8 258 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 MARVELD2Q8N4S9 558 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 TRMT10AQ8TBZ6 339 aaKnown RBP8.02□□□□□ -1.13
UPF2-202ENST00000357604 ITLN2Q8WWU7 325 aaPredicted RBP8.02□□□□□ -1.13
UPF2-202ENST00000357604 ZCCHC4Q9H5U6 513 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 FGF20Q9NP95 211 aaPredicted RBP8.02□□□□□ -1.13
UPF2-202ENST00000357604 RER1O15258 196 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 INMTO95050 263 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 CAPNS1P04632 268 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 NR4A1P22736 598 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 STAC2Q6ZMT1 411 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 NAXEQ8NCW5 288 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 UBASH3BQ8TF42 649 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 ANKRD12Q6UB98 2062 aa8.02□□□□□ -1.13
UPF2-202ENST00000357604 PYCARD-AS1I3L0S3 204 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 NDUFA2O43678 99 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 APOL3O95236 402 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 RPL5P46777 297 aaKnown RBP8.01□□□□□ -1.13
UPF2-202ENST00000357604 DAZAP2Q15038 168 aaPredicted RBP8.01□□□□□ -1.13
UPF2-202ENST00000357604 TSC22D1Q15714 1073 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 GDPD3Q7L5L3 318 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 SPSB1Q96BD6 273 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 MED30Q96HR3 178 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 PLCXD1Q9NUJ7 323 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 PSORS1C1Q9UIG5 152 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 IGHV2OR16-5A0A0B4J2B6 119 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 LOC107986453A0A1B0GWG9 222 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 TMEM129A0AVI4 362 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 ZNF850A8MQ14 1090 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 UCHL1P09936 223 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 CELP19835 753 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 GABRR1P24046 479 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 ADORA2A-AS1P86434 159 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 ZNF627Q7L945 461 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 RNF133Q8WVZ7 376 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 SMURF1Q9HCE7 757 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 GPR84Q9NQS5 396 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 ATP6V1G2-DDX39BF2Z307 99 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 GSTT2BP0CG30 244 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 TGM4P49221 684 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 EVX1P49640 407 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 MICBQ29980 383 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 ATAD3CQ5T2N8 411 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 OR2T2Q6IF00 324 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 THSD4Q6ZMP0 1018 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 TMEM179BQ7Z7N9 219 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 OR51T1Q8NGJ9 327 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 OR5D13Q8NGL4 314 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 H1FXQ92522 213 aaKnown RBP8.01□□□□□ -1.13
UPF2-202ENST00000357604 TSSK2Q96PF2 358 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 SPACA1Q9HBV2 294 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 NPTNQ9Y639 398 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 DOCK9Q9BZ29 2069 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.01□□□□□ -1.13
UPF2-202ENST00000357604 ANKRD61A6NGH8 418 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 PRSS23O95084 383 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 LYPD3O95274 346 aa8.01□□□□□ -1.13
UPF2-202ENST00000357604 PPOXP50336 477 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms