RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 GATCO43716 136 aaKnown RBP11.71□□□□□ -0.54
SMC4-202ENST00000357388 COX20Q5RI15 118 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 C6orf15Q6UXA7 325 aaPredicted RBP11.71□□□□□ -0.54
SMC4-202ENST00000357388 CSF3RQ99062 836 aa11.71□□□□□ -0.54
SMC4-202ENST00000357388 DOK2O60496 412 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 ABCD3P28288 659 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 ERVFC1-1P60608 527 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 RPL11P62913 178 aaKnown RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 ERV3-1Q14264 604 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 IGSF11Q5DX21 431 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 BCDIN3DQ7Z5W3 292 aaKnown RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 ARRDC1Q8N5I2 433 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 IFI44Q8TCB0 444 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 HAPLN2Q9GZV7 340 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 SLC17A5Q9NRA2 495 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 TSPAN12O95859 305 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 RPLP1P05386 114 aaKnown RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 CYC1P08574 325 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 APOBEC1P41238 236 aaKnown RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 SLC16A12Q6ZSM3 486 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 WDR89Q96FK6 387 aaPredicted RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 IER2Q9BTL4 223 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 EDEM2Q9BV94 578 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 CDCP1Q9H5V8 836 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 OCEL1Q9H607 264 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 ESRP2Q9H6T0 727 aaKnown RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 SLC5A6Q9Y289 635 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 FZD6O60353 706 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 ALOX12BO75342 701 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 C1SP09871 688 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 PTHLHP12272 177 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 TMEM128Q5BJH2 165 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 DLEU7Q6UYE1 221 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 OLIG1Q8TAK6 271 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 PTDSS2Q9BVG9 487 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 PHLPP1O60346 1717 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 SH2D1BO14796 132 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 TMEM11P17152 192 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 SPCS3P61009 180 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 PNRC1Q12796 327 aaPredicted RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 ACKR1Q16570 336 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 ELFN2Q5R3F8 820 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 CYHR1Q6ZMK1 362 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 SPICQ8N5J4 248 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 TMEM99Q8N816 258 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 MZB1Q8WU39 189 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 KIAA1324LA8MWY0 1029 aaPredicted RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 BANF2Q9H503 90 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 HS3ST2Q9Y278 367 aa11.7□□□□□ -0.54
SMC4-202ENST00000357388 RCL1Q9Y2P8 373 aaKnown RBP11.7□□□□□ -0.54
SMC4-202ENST00000357388 MEIKINA0A087WXM9 373 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 A0A1B0GX78 115 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 VAMP5O95183 116 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 OR5H8P0DN80 308 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 GPR12P47775 334 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 OR5I1Q13606 314 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 CDK5R1Q15078 307 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 FOXB2Q5VYV0 432 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 MED25Q71SY5 747 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 SLCO4A1Q96BD0 722 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 PLA2G12AQ9BZM1 189 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 CSNK1G1Q9HCP0 422 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 SDHBP21912 280 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 GALP22466 123 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 NHLH1Q02575 133 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 NHLH2Q02577 135 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 C11orf42Q8N5U0 333 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 FAM210BQ96KR6 192 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 LYRM4Q9HD34 91 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 A0A1B0GTQ1 180 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 M0QZ24 198 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 CTNSO60931 367 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 IL2RAP01589 272 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 CD3DP04234 171 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 OR5G3P0C626 314 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 PSMB5P28074 263 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 HOXD9P28356 352 aaPredicted RBP11.69□□□□□ -0.54
SMC4-202ENST00000357388 MAT1AQ00266 395 aaKnown RBP11.69□□□□□ -0.54
SMC4-202ENST00000357388 MAML2Q8IZL2 1156 aaPredicted RBP11.69□□□□□ -0.54
SMC4-202ENST00000357388 GOT1L1Q8NHS2 421 aaPredicted RBP11.69□□□□□ -0.54
SMC4-202ENST00000357388 SARAFQ96BY9 339 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 LHX3Q9UBR4 397 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 SLC17A4Q9Y2C5 497 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 A0A087X0M5 115 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 A0A1B0GX30 115 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 M0R1X1 148 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 OPN1MWP04001 364 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 OPN1MW2P0DN77 364 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 OPN1MW3P0DN78 364 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 GPNMBQ14956 572 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 VRK3Q8IV63 474 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 NEURL2Q9BR09 285 aa11.69□□□□□ -0.54
SMC4-202ENST00000357388 IKZF5Q9H5V7 419 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms