RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PRR32B1ATL7 298 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 ANXA2P07355 339 aaKnown RBP13.37□□□□□ -0.27
TRIM13-201ENST00000356017 DANCRP0C864 163 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF250P15622 560 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF121P58317 390 aaPredicted RBP13.37□□□□□ -0.27
TRIM13-201ENST00000356017 MOGQ16653 247 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 RBM48Q5RL73 367 aaKnown RBP13.37□□□□□ -0.27
TRIM13-201ENST00000356017 MBNL2Q5VZF2 373 aaKnown RBP13.37□□□□□ -0.27
TRIM13-201ENST00000356017 AHSA2Q719I0 299 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 LHFPL3Q86UP9 236 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 SYS1Q8N2H4 156 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 SYNPRQ8TBG9 265 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 SLC25A40Q8TBP6 338 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 MYDGFQ969H8 173 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 MARS2Q96GW9 593 aaKnown RBP13.37□□□□□ -0.27
TRIM13-201ENST00000356017 ALG8Q9BVK2 526 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 OR2J1Q9GZK6 312 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 PLK3Q9H4B4 646 aa13.37□□□□□ -0.27
TRIM13-201ENST00000356017 B9A039 149 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 PTGES3LE9PB15 166 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 ERVS71-1P61550 626 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 EFNB3Q15768 340 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 DTX2Q86UW9 622 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF786Q8N393 782 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 KLF14Q8TD94 323 aaPredicted RBP13.36□□□□□ -0.27
TRIM13-201ENST00000356017 HAVCR2Q8TDQ0 301 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 OPA3Q9H6K4 179 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 MOB1AQ9H8S9 216 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 CBLN4Q9NTU7 201 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 FKBP14Q9NWM8 211 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 DUSP13Q9UII6 198 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 GNG8Q9UK08 70 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 LRRC42Q9Y546 428 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 ABCA4P78363 2273 aa13.36□□□□□ -0.27
TRIM13-201ENST00000356017 MAGEB4O15481 346 aaPredicted RBP13.35□□□□□ -0.27
TRIM13-201ENST00000356017 XRCC2O43543 280 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 ATE1O95260 518 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 SLC2A1P11166 492 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 RAC2P15153 192 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 CRHBPP24387 322 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 KLF3P57682 345 aaPredicted RBP13.35□□□□□ -0.27
TRIM13-201ENST00000356017 KRTAP10-9P60411 292 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 MRPL28Q13084 256 aaKnown RBP13.35□□□□□ -0.27
TRIM13-201ENST00000356017 SPATA46Q5T0L3 261 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 LIPNQ5VXI9 398 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 FBXW12Q6X9E4 464 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 TMPRSS11AQ6ZMR5 421 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 FAM57BQ71RH2 274 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 PRSS45Q7RTY3 260 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 PGAM5Q96HS1 289 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 RHNO1Q9BSD3 238 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 OR10A2Q9H208 303 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 RGCCQ9H4X1 137 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 BRD7Q9NPI1 651 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 GPR160Q9UJ42 338 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF391Q9UJN7 358 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 LAMP3Q9UQV4 416 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 CAB39Q9Y376 341 aaPredicted RBP13.35□□□□□ -0.27
TRIM13-201ENST00000356017 N6AMT1Q9Y5N5 214 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 SNX5Q9Y5X3 404 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 R4GMQ9 66 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 CRYBG3Q68DQ2 2970 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 HECTD1Q9ULT8 2610 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 IGLV3-9A0A075B6K5 115 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 TBX1O43435 398 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 LIMS3P0CW19 117 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 LIMS4P0CW20 117 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 CFL1P23528 166 aaKnown RBP13.35□□□□□ -0.27
TRIM13-201ENST00000356017 OR12D2P58182 307 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 SNAI3Q3KNW1 292 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 TP53I3Q53FA7 332 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 PAMR1Q6UXH9 720 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 PIGTQ969N2 578 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 C4orf36Q96KX1 117 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF649Q9BS31 505 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 YTHDF1Q9BYJ9 559 aaKnown RBP13.35□□□□□ -0.27
TRIM13-201ENST00000356017 MRPL37Q9BZE1 423 aaKnown RBP13.35□□□□□ -0.27
TRIM13-201ENST00000356017 DUSP21Q9H596 190 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 FAM206AQ9NX38 181 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 UBAP1Q9NZ09 502 aa13.35□□□□□ -0.27
TRIM13-201ENST00000356017 LOC110117498-PIK3R3F6TDL0 507 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 J3QLW9 94 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 RPP14O95059 124 aaKnown RBP13.34□□□□□ -0.27
TRIM13-201ENST00000356017 IGHV3-13P01766 116 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 MT-ND5P03915 603 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 RAF1P04049 648 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 CDK1P06493 297 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 SOD3P08294 240 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 ZNF19P17023 458 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 SNRPD2P62316 118 aaKnown RBP13.34□□□□□ -0.27
TRIM13-201ENST00000356017 SLC35A2P78381 396 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 TIGD6Q17RP2 521 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 SWI5Q1ZZU3 235 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 PGAP1Q75T13 922 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 KLHL36Q8N4N3 616 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 HAVCR1Q96D42 359 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 LURAP1Q96LR2 239 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 CCL19Q99731 98 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 SYT3Q9BQG1 590 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 TRAF4Q9BUZ4 470 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms