RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 VAX2Q9UIW0 290 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 TCFL5Q9UL49 500 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 SIGLEC7Q9Y286 467 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 DENND4CQ5VZ89 1909 aa14.12□□□□□ -0.15
RTN3-205ENST00000356000 CASTOR2A6NHX0 329 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 RPS24P62847 133 aaKnown RBP14.11□□□□□ -0.15
RTN3-205ENST00000356000 H3F3AP84243 136 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 AADACL3Q5VUY0 350 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 OPN5Q6U736 354 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 KIRREL2Q6UWL6 708 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 SSX7Q7RTT5 188 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 KCNK15Q9H427 330 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 CAPN10Q9HC96 672 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 RAB18Q9NP72 206 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 FOXD3Q9UJU5 478 aaPredicted RBP14.11□□□□□ -0.15
RTN3-205ENST00000356000 PCDHB8Q9UN66 801 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 A0A0G2JN53 185 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 LEFTY2O00292 366 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 STK17BO94768 372 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 SGSHP51688 502 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 RAB32Q13637 225 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 SLC25A24Q6NUK1 477 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 WDR88Q6ZMY6 472 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 SLC35E3Q7Z769 313 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 TMEM104Q8NE00 496 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 PPTC7Q8NI37 304 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 MRGPRDQ8TDS7 321 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 PRAP1Q96NZ9 151 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 ALKBH3Q96Q83 286 aaPredicted RBP14.11□□□□□ -0.15
RTN3-205ENST00000356000 INTS14Q96SY0 518 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 SERINC1Q9NRX5 453 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 LOC100289279A0A1B0GTE1 492 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 SCAF4O95104 1147 aaKnown RBP14.11□□□□□ -0.15
RTN3-205ENST00000356000 CXCR1P25024 350 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 LSSP48449 732 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 CAMLGP49069 296 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 SELENOTP62341 195 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 SLC35A1P78382 337 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 C1orf87Q8N0U7 546 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 LFNGQ8NES3 379 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 PFN4Q8NHR9 129 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 ZNF417Q8TAU3 575 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 COL26A1Q96A83 441 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 CCDC74AQ96AQ1 378 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 FAM3DQ96BQ1 224 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 ARV1Q9H2C2 271 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 CDH20Q9HBT6 801 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 MSL2Q9HCI7 577 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 CLDND1Q9NY35 253 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 KLK13Q9UKR3 277 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 KCNE3Q9Y6H6 103 aa14.11□□□□□ -0.15
RTN3-205ENST00000356000 TRBV5-7A0A0A0MS05 114 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 NKX6-3A6NJ46 265 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 ELOA3DA6NLF2 546 aaPredicted RBP14.1□□□□□ -0.15
RTN3-205ENST00000356000 HSD17B6O14756 317 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 PLRG1O43660 514 aaKnown RBP14.1□□□□□ -0.15
RTN3-205ENST00000356000 PCCBP05166 539 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 ATP1B2P14415 290 aaPredicted RBP14.1□□□□□ -0.15
RTN3-205ENST00000356000 CEACAM8P31997 349 aaPredicted RBP14.1□□□□□ -0.15
RTN3-205ENST00000356000 RHOAP61586 193 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 ZNF705AQ6ZN79 300 aaPredicted RBP14.1□□□□□ -0.15
RTN3-205ENST00000356000 OIT3Q8WWZ8 545 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 METTL21AQ8WXB1 218 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 DNASE2BQ8WZ79 361 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 FBXL17Q9UF56 701 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 DKKL1Q9UK85 242 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 KCNK6Q9Y257 313 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 LEFTY1O75610 366 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 MMP3P08254 477 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 SEC11BP0C7V7 166 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 FGF5P12034 268 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 FOLR1P15328 257 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 NPPBP16860 134 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 HOXC12P31275 282 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 IL15RAQ13261 267 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 DUSP28Q4G0W2 176 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 SLC25A26Q70HW3 274 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 SMIM15Q7Z3B0 74 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 C9orf40Q8IXQ3 194 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 C5orf34Q96MH7 638 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 PRSS16Q9NQE7 514 aa14.1□□□□□ -0.15
RTN3-205ENST00000356000 NUP210LQ5VU65 1888 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 PLPP1O14494 284 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 SOCS5O75159 536 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 ZNF888P0CJ79 500 aaPredicted RBP14.09□□□□□ -0.15
RTN3-205ENST00000356000 PRKAG1P54619 331 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 LASP1Q14847 261 aaKnown RBP14.09□□□□□ -0.15
RTN3-205ENST00000356000 ZNF584Q8IVC4 421 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 C11orf42Q8N5U0 333 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 SNIP1Q8TAD8 396 aaKnown RBP14.09□□□□□ -0.15
RTN3-205ENST00000356000 C2orf15Q8WU43 125 aaKnown RBP14.09□□□□□ -0.15
RTN3-205ENST00000356000 FBXO32Q969P5 355 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 ZNF764Q96H86 408 aaPredicted RBP14.09□□□□□ -0.15
RTN3-205ENST00000356000 Q96M85 177 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 ZNF2Q9BSG1 426 aaPredicted RBP14.09□□□□□ -0.15
RTN3-205ENST00000356000 GLIPR2Q9H4G4 154 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 AHSPQ9NZD4 102 aa14.09□□□□□ -0.15
RTN3-205ENST00000356000 CXXC1Q9P0U4 656 aaPredicted RBP14.09□□□□□ -0.15
RTN3-205ENST00000356000 POLR3KQ9Y2Y1 108 aaPredicted RBP14.09□□□□□ -0.15
RTN3-205ENST00000356000 CATP04040 527 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms