RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SLC7A6Q92536 515 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 MED9Q9NWA0 146 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 URGCP-MRPS24S4R325 110 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 A3GALT2U3KPV4 340 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 A0A1B0GTL3 188 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 OR2A14Q96R47 310 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 ZPBPQ9BS86 351 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 NUDT9Q9BW91 350 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 PLA2G2FQ9BZM2 168 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 SCPEP1Q9HB40 452 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 XRCC3O43542 346 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 NME2P1O60361 137 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 IAPPP10997 89 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 HNF1AP20823 631 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 GPR3P46089 330 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 ZNF121P58317 390 aaPredicted RBP11.96□□□□□ -0.49
SCN8A-202ENST00000355133 UBE2MP61081 183 aaKnown RBP11.96□□□□□ -0.49
SCN8A-202ENST00000355133 FZD2Q14332 565 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 CD276Q5ZPR3 534 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 SLC25A26Q70HW3 274 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 OR52H1Q8NGJ2 320 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 NT5CQ8TCD5 201 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 KISS1RQ969F8 398 aaPredicted RBP11.96□□□□□ -0.49
SCN8A-202ENST00000355133 LRFN5Q96NI6 719 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 ALKBH3Q96Q83 286 aaPredicted RBP11.96□□□□□ -0.49
SCN8A-202ENST00000355133 DDOQ99489 341 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 TCEAL7Q9BRU2 100 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 ISG20L2Q9H9L3 353 aaKnown RBP11.96□□□□□ -0.49
SCN8A-202ENST00000355133 RNF150Q9ULK6 438 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 GAB2Q9UQC2 676 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 ARID1BQ8NFD5 2236 aaPredicted RBP11.96□□□□□ -0.49
SCN8A-202ENST00000355133 TOGARAM1Q9Y4F4 1720 aa11.96□□□□□ -0.49
SCN8A-202ENST00000355133 CCDC187A0A096LP49 1063 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 ARPC4-TTLL3A0A0A6YYG9 625 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 ARPC3O15145 178 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 UBE2IP63279 158 aaKnown RBP11.96□□□□□ -0.5
SCN8A-202ENST00000355133 SPEM2Q0P670 501 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 PTOV1Q86YD1 416 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 TECTBQ96PL2 329 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 QPCTLQ9NXS2 382 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 FAM96BQ9Y3D0 163 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 A0A087WZY1 265 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 A0A0A6YYD5 115 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 C20orf202A1L168 122 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 DHHO43323 396 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 OR5G3P0C626 314 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 OR1C1Q15619 314 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 ZNF628Q5EBL2 1059 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 ELFN2Q5R3F8 820 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 CREB3L2Q70SY1 520 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 TMEM179BQ7Z7N9 219 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 CMTM4Q8IZR5 234 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 OR2AK2Q8NG84 335 aa11.96□□□□□ -0.5
SCN8A-202ENST00000355133 SPACA9Q96E40 222 aaPredicted RBP11.96□□□□□ -0.5
SCN8A-202ENST00000355133 TCRBV5S2A0A599 114 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 KRBOX1C9JBD0 128 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 AIPO00170 330 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 CSN1S1P47710 185 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 BAMBIQ13145 260 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 GUSBP11Q6P575 273 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 DBX2Q6ZNG2 339 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 S1PR3Q99500 378 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 GALR2O43603 387 aaPredicted RBP11.95□□□□□ -0.5
SCN8A-202ENST00000355133 SPRY1O43609 319 aaPredicted RBP11.95□□□□□ -0.5
SCN8A-202ENST00000355133 POU3F3P20264 500 aaPredicted RBP11.95□□□□□ -0.5
SCN8A-202ENST00000355133 FCGR2CP31995 323 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 TMEM268Q5VZI3 342 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 JAM3Q9BX67 310 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 KCNE3Q9Y6H6 103 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 MN1Q10571 1320 aaPredicted RBP11.95□□□□□ -0.5
SCN8A-202ENST00000355133 PPM1DO15297 605 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 ARRB2P32121 409 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 FABP5Q01469 135 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 BPIFCQ8NFQ6 507 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 MARC2Q969Z3 335 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 IER2Q9BTL4 223 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 ANKUB1A6NFN9 424 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 PTBP1P26599 531 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCN8A-202ENST00000355133 CEACAM16Q2WEN9 425 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 WIPI1Q5MNZ9 446 aaPredicted RBP11.95□□□□□ -0.5
SCN8A-202ENST00000355133 RGS7BPQ6MZT1 257 aaPredicted RBP11.95□□□□□ -0.5
SCN8A-202ENST00000355133 STAC2Q6ZMT1 411 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 RPP25Q9BUL9 199 aaKnown RBP11.95□□□□□ -0.5
SCN8A-202ENST00000355133 CDCA4Q9BXL8 241 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 SLC25A19Q9HC21 320 aa11.95□□□□□ -0.5
SCN8A-202ENST00000355133 LILRA5A6NI73 299 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 H2AFB1P0C5Y9 115 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 TOR2AQ5JU69 321 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 DHRS13Q6UX07 377 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 FBXO17Q96EF6 278 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 AK3Q9UIJ7 227 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 ZNF724A8MTY0 619 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 GPR37O15354 613 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 SMIM18P0DKX4 95 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 DSCR4P56555 118 aaPredicted RBP11.94□□□□□ -0.5
SCN8A-202ENST00000355133 FAM219BQ5XKK7 198 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 OR1J1Q8NGS3 322 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 SMIM19Q96E16 107 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 SERGEFQ9UGK8 458 aa11.94□□□□□ -0.5
SCN8A-202ENST00000355133 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms