RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 FGF20Q9NP95 211 aaPredicted RBP19.02■□□□□ 0.64
SHMT1-203ENST00000354098 FAIMQ9NVQ4 179 aa19.02■□□□□ 0.64
SHMT1-203ENST00000354098 PTTG3PQ9NZH4 202 aa19.02■□□□□ 0.64
SHMT1-203ENST00000354098 SPG11Q96JI7 2443 aa19.02■□□□□ 0.64
SHMT1-203ENST00000354098 ZNF254O75437 659 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 ANXA2P07355 339 aaKnown RBP19.01■□□□□ 0.63
SHMT1-203ENST00000354098 ZNF250P15622 560 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 RIDAP52758 137 aaKnown RBP19.01■□□□□ 0.63
SHMT1-203ENST00000354098 HLXQ14774 488 aaPredicted RBP19.01■□□□□ 0.63
SHMT1-203ENST00000354098 TP53I3Q53FA7 332 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 DTX2Q86UW9 622 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 TRAF4Q9BUZ4 470 aaPredicted RBP19.01■□□□□ 0.63
SHMT1-203ENST00000354098 PLK3Q9H4B4 646 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 ZNF319Q9P2F9 582 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 PSORS1C1Q9UIG5 152 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 VSTM5A8MXK1 200 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 CD53P19397 219 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 PRSS12P56730 875 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 SWI5Q1ZZU3 235 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 ZNF718Q3SXZ3 478 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 AGAP6Q5VW22 663 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 FAM57BQ71RH2 274 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 YIPF7Q8N8F6 280 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 SYNPRQ8TBG9 265 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 IGFBPL1Q8WX77 278 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 CCL19Q99731 98 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 NIPAL2Q9H841 368 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 CBLN4Q9NTU7 201 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 ERVK13-1Q9NX77 482 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 UBAP1Q9NZ09 502 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 ST6GALNAC2Q9UJ37 374 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 CSMD1Q96PZ7 3565 aa19.01■□□□□ 0.63
SHMT1-203ENST00000354098 METTL15A6NJ78 407 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 CYSRT1A8MQ03 144 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 J3QW42 95 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 SLC1A7O00341 560 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 DENRO43583 198 aaKnown RBP19■□□□□ 0.63
SHMT1-203ENST00000354098 PNPP00491 289 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 APOC1P02654 83 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 KRT8P05787 483 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 PSMA6P60900 246 aaKnown RBP19■□□□□ 0.63
SHMT1-203ENST00000354098 ST3GAL4Q11206 333 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 EFNB3Q15768 340 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 C11orf71Q6IPW1 123 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 C1orf174Q8IYL3 243 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 OR5L1Q8NGL2 311 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 OR2AE1Q8NHA4 323 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 FAM206AQ9NX38 181 aa19■□□□□ 0.63
SHMT1-203ENST00000354098 TMEM269A0A1B0GVZ9 245 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 TBX1O43435 398 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 SRSF10O75494 262 aaKnown RBP18.99■□□□□ 0.63
SHMT1-203ENST00000354098 RPP14O95059 124 aaKnown RBP18.99■□□□□ 0.63
SHMT1-203ENST00000354098 ATE1O95260 518 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 RAF1P04049 648 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 LIMS3P0CW19 117 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 LIMS4P0CW20 117 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 DCKP27707 260 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 GCH1P30793 250 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 DCTDP32321 178 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 OR12D2P58182 307 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 MFGE8Q08431 387 aaPredicted RBP18.99■□□□□ 0.63
SHMT1-203ENST00000354098 GALEQ14376 348 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 ALKBH6Q3KRA9 238 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 CDONQ4KMG0 1287 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 GLYATL3Q5SZD4 288 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 LIPNQ5VXI9 398 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 MBNL2Q5VZF2 373 aaKnown RBP18.99■□□□□ 0.63
SHMT1-203ENST00000354098 AHSA2Q719I0 299 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 ZNF540Q8NDQ6 660 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 PPP1R14AQ96A00 147 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 CMBLQ96DG6 245 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 COG8Q96MW5 612 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 ALG8Q9BVK2 526 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 GNG8Q9UK08 70 aa18.99■□□□□ 0.63
SHMT1-203ENST00000354098 IGLV3-9A0A075B6K5 115 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 B9A039 149 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 SULT1C4O75897 302 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 PIPP12273 146 aaPredicted RBP18.98■□□□□ 0.63
SHMT1-203ENST00000354098 ETV1P50549 477 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 KLF3P57682 345 aaPredicted RBP18.98■□□□□ 0.63
SHMT1-203ENST00000354098 PSG7Q13046 419 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 GK2Q14410 553 aaPredicted RBP18.98■□□□□ 0.63
SHMT1-203ENST00000354098 SGCDQ92629 289 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 TMEM80Q96HE8 168 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 JAM3Q9BX67 310 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 Q9H521 79 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 ISG20L2Q9H9L3 353 aaKnown RBP18.98■□□□□ 0.63
SHMT1-203ENST00000354098 INPP5EQ9NRR6 644 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 ACOXLQ9NUZ1 547 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 FKBP14Q9NWM8 211 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 CNOT2Q9NZN8 540 aaKnown RBP18.98■□□□□ 0.63
SHMT1-203ENST00000354098 DIMT1Q9UNQ2 313 aaKnown RBP18.98■□□□□ 0.63
SHMT1-203ENST00000354098 DSCAMO60469 2012 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 IRGMA1A4Y4 181 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 EFCAB10A6NFE3 127 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 PTGES3LE9PB15 166 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 TUBG1P23258 451 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 CDKN1AP38936 164 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 ZNF92Q03936 586 aa18.98■□□□□ 0.63
SHMT1-203ENST00000354098 SGK3Q96BR1 496 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms