RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TMEM33P57088 247 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 CLN3Q13286 438 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 ZNF550Q7Z398 422 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 PEG10Q86TG7 708 aaKnown RBP11.88□□□□□ -0.51
IFT88-202ENST00000351808 ZNF595Q8IYB9 648 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 OR9A4Q8NGU2 314 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 CMBLQ96DG6 245 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 ADGRG7Q96K78 797 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 CMKLR1Q99788 373 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 KXD1Q9BQD3 176 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 ALG12Q9BV10 488 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 PBDC1Q9BVG4 233 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 AICDAQ9GZX7 198 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 Q9N2J8 555 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 ABT1Q9ULW3 272 aaKnown RBP11.88□□□□□ -0.51
IFT88-202ENST00000351808 TCF20Q9UGU0 1960 aaKnown RBP11.87□□□□□ -0.51
IFT88-202ENST00000351808 IFNA6P05013 189 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 DANCRP0C864 163 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 GIMD1P0DJR0 217 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 GDI1P31150 447 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 GABRA4P48169 554 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 DLK1P80370 383 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 GLO1Q04760 184 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 NCR3LG1Q68D85 454 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 TANGO2Q6ICL3 276 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 CLEC18BQ6UXF7 455 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 MDGA2Q7Z553 956 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 ZNF248Q8NDW4 579 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 DOK4Q8TEW6 326 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 TIFAQ96CG3 184 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 FAM83CQ9BQN1 747 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 GPR87Q9BY21 358 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 SLC26A1Q9H2B4 701 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 RAB18Q9NP72 206 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 LUZP4Q9P127 313 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 RAB22AQ9UL26 194 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 VWA8A3KMH1 1905 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 SERPINA2P20848 420 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 HAGHQ16775 308 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 EIPR1Q53HC9 387 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 TMEM31Q5JXX7 168 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 LINC01590Q5TEZ4 76 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 FAM166AQ6J272 317 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 APCDD1LQ8NCL9 501 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 GLYATL1Q969I3 302 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 COL26A1Q96A83 441 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 FAM210BQ96KR6 192 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 C2orf50Q96LR7 162 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 LANCL2Q9NS86 450 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 FBXO34Q9NWN3 711 aa11.87□□□□□ -0.51
IFT88-202ENST00000351808 NUP210LQ5VU65 1888 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 K7EPK0 472 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 PQBP1O60828 265 aaKnown RBP11.86□□□□□ -0.51
IFT88-202ENST00000351808 CA11O75493 328 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 NDUFB2O95178 105 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 ABHD16AO95870 558 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 RPLP1P05386 114 aaKnown RBP11.86□□□□□ -0.51
IFT88-202ENST00000351808 OR5H8P0DN80 308 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 CTSAP10619 480 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 CD70P32970 193 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 SMAD3P84022 425 aaKnown RBP11.86□□□□□ -0.51
IFT88-202ENST00000351808 LMAN2Q12907 356 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 ANKRD55Q3KP44 614 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 TMEM128Q5BJH2 165 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 ASPHD2Q6ICH7 369 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 FAM71E2Q8N5Q1 922 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 SLC35G3Q8N808 338 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 OR5AR1Q8NGP9 310 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 RNASEH2CQ8TDP1 164 aaKnown RBP11.86□□□□□ -0.51
IFT88-202ENST00000351808 KLF16Q9BXK1 252 aaPredicted RBP11.86□□□□□ -0.51
IFT88-202ENST00000351808 ZNF107Q9UII5 783 aaPredicted RBP11.86□□□□□ -0.51
IFT88-202ENST00000351808 PITPNC1Q9UKF7 332 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 MRPS18BQ9Y676 258 aaKnown RBP11.86□□□□□ -0.51
IFT88-202ENST00000351808 POLR2AP24928 1970 aaKnown RBP11.86□□□□□ -0.51
IFT88-202ENST00000351808 DCDC2BA2VCK2 349 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 GALTP07902 379 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 PET100P0DJ07 73 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 KIR3DL2P43630 455 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 SLC35A1P78382 337 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 HERPUD1Q15011 391 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 TRAM1L1Q8N609 369 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 POC1AQ8NBT0 407 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 SHDQ96IW2 340 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 DIRC2Q96SL1 478 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 KCNK6Q9Y257 313 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 COLEC10Q9Y6Z7 277 aa11.86□□□□□ -0.51
IFT88-202ENST00000351808 WIPF3A6NGB9 483 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 MASP2O00187 686 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 ATXN7O15265 892 aaPredicted RBP11.85□□□□□ -0.51
IFT88-202ENST00000351808 DFFBO76075 338 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 GAPDHP04406 335 aaKnown RBP11.85□□□□□ -0.51
IFT88-202ENST00000351808 PNLIPP16233 465 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 ZNF708P17019 499 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 OR3A1P47881 315 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 RPL29P47914 159 aaKnown RBP11.85□□□□□ -0.51
IFT88-202ENST00000351808 DUSP8Q13202 625 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 FAM78AQ5JUQ0 283 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 ETFRF1Q6IPR1 90 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 TEX38Q6PEX7 206 aa11.85□□□□□ -0.51
IFT88-202ENST00000351808 BTNL3Q6UXE8 466 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms