RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 A0A0U1RQV5 110 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 A0A1W2PPZ6 126 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 MBD3L4A6NDZ8 208 aaPredicted RBP16.32■□□□□ 0.2
PTN-201ENST00000348225 MBD3L3A6NE82 208 aaPredicted RBP16.32■□□□□ 0.2
PTN-201ENST00000348225 MBD3L5A6NJ08 208 aaPredicted RBP16.32■□□□□ 0.2
PTN-201ENST00000348225 IFITM5A6NNB3 132 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 MAS1P04201 325 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 FAM87AP0C7U9 286 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 ABOP16442 354 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 ARR3P36575 388 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 FOXG1P55316 489 aaPredicted RBP16.32■□□□□ 0.2
PTN-201ENST00000348225 RSPO1Q2MKA7 263 aaPredicted RBP16.32■□□□□ 0.2
PTN-201ENST00000348225 KRTAP27-1Q3LI81 207 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 PABPC1L2AQ5JQF8 200 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 TMEM53Q6P2H8 277 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 Q8NA96 180 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 CCDC54Q8NEL0 328 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 OR52H1Q8NGJ2 320 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 OR1K1Q8NGR3 316 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 MBD3L2Q8NHZ7 208 aaPredicted RBP16.32■□□□□ 0.2
PTN-201ENST00000348225 FGFBP3Q8TAT2 258 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 NANOS1Q8WY41 292 aaKnown RBP16.32■□□□□ 0.2
PTN-201ENST00000348225 SLC7A6Q92536 515 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 GFI1Q99684 422 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 OR10A2Q9H208 303 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 GPR84Q9NQS5 396 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 TAS2R4Q9NYW5 299 aa16.32■□□□□ 0.2
PTN-201ENST00000348225 A0A1B0GTI1 187 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 TBX1O43435 398 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 UBL3O95164 117 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 ITGA5P08648 1049 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 DBHP09172 617 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 IGFBP3P17936 291 aaPredicted RBP16.31■□□□□ 0.2
PTN-201ENST00000348225 ADRA2CP18825 462 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 PER3P56645 1201 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 TGFBR3Q03167 851 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 EIF2S3LQ2VIR3 472 aaKnown RBP16.31■□□□□ 0.2
PTN-201ENST00000348225 C1orf185Q5T7R7 199 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 LRRC28Q86X40 367 aaPredicted RBP16.31■□□□□ 0.2
PTN-201ENST00000348225 SERPINA12Q8IW75 414 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 ZNF671Q8TAW3 534 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 V9GYH0 126 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 PTPRQQ9UMZ3 2332 aa16.31■□□□□ 0.2
PTN-201ENST00000348225 MEGF11A6BM72 1044 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 FABP12A6NFH5 140 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 C1QTNF9BB2RNN3 333 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 FAM25AB3EWG3 89 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 FAM25CB3EWG5 89 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 FAM25GB3EWG6 89 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 IL18BPO95998 194 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 HOXD4P09016 255 aaPredicted RBP16.3■□□□□ 0.2
PTN-201ENST00000348225 C1QTNF9P0C862 333 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 COX5BP10606 129 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 ZNF20P17024 532 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 KIR2DL2P43627 348 aaPredicted RBP16.3■□□□□ 0.2
PTN-201ENST00000348225 GFOD2Q3B7J2 385 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 HES5Q5TA89 166 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 METAP1DQ6UB28 335 aaPredicted RBP16.3■□□□□ 0.2
PTN-201ENST00000348225 FAM131AQ6UXB0 335 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 UNQ6494/PRO21346Q6UXR6 183 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 CD163Q86VB7 1156 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 SAMD12Q8N8I0 201 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 FAM57AQ8TBR7 257 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 FGGYQ96C11 551 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 ZNF224Q9NZL3 707 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 ZNF319Q9P2F9 582 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 DOCK7Q96N67 2140 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 IGLV3-1P01715 115 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 HLA-HP01893 362 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 CRHP06850 196 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 CD79AP11912 226 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 TALDO1P37837 337 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 GNALP38405 381 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 LINC00303Q3SY05 128 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 SFRP5Q5T4F7 317 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 ASPHD2Q6ICH7 369 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 CNIH2Q6PI25 160 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 Q6ZT83 130 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 NAA40Q86UY6 237 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 CISD2Q8N5K1 135 aaKnown RBP16.3■□□□□ 0.2
PTN-201ENST00000348225 NKAIN3Q8N8D7 197 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 ZCCHC14Q8WYQ9 949 aaKnown RBP16.3■□□□□ 0.2
PTN-201ENST00000348225 FAM71F1Q96KD3 344 aaPredicted RBP16.3■□□□□ 0.2
PTN-201ENST00000348225 CCDC32Q9BV29 185 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 PLEKHA1Q9HB21 404 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 SPATA2Q9UM82 520 aa16.3■□□□□ 0.2
PTN-201ENST00000348225 PAHP00439 452 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 CALCBP10092 127 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 SNRPBP14678 240 aaKnown RBP16.29■□□□□ 0.2
PTN-201ENST00000348225 PTBP1P26599 531 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTN-201ENST00000348225 CFPP27918 469 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 EVX1P49640 407 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 TDGF1P3P51864 188 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 ZNF181Q2M3W8 571 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 GLT8D1Q68CQ7 371 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 DNAAF1Q8NEP3 725 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 OR5D14Q8NGL3 314 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 OR1J2Q8NGS2 313 aa16.29■□□□□ 0.2
PTN-201ENST00000348225 BCL2L2Q92843 193 aaPredicted RBP16.29■□□□□ 0.2
PTN-201ENST00000348225 CMTM3Q96MX0 182 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms