RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 VHLLQ6RSH7 139 aa11.85□□□□□ -0.51
CASC4-202ENST00000345795 RNF144BQ7Z419 303 aa11.85□□□□□ -0.51
CASC4-202ENST00000345795 RELL2Q8NC24 303 aaPredicted RBP11.85□□□□□ -0.51
CASC4-202ENST00000345795 HOXB13Q92826 284 aaPredicted RBP11.85□□□□□ -0.51
CASC4-202ENST00000345795 ADAT3Q96EY9 351 aaPredicted RBP11.85□□□□□ -0.51
CASC4-202ENST00000345795 SGCZQ96LD1 299 aa11.85□□□□□ -0.51
CASC4-202ENST00000345795 MED18Q9BUE0 208 aa11.85□□□□□ -0.51
CASC4-202ENST00000345795 EDEM2Q9BV94 578 aa11.85□□□□□ -0.51
CASC4-202ENST00000345795 POFUT1Q9H488 388 aa11.85□□□□□ -0.51
CASC4-202ENST00000345795 HS3ST3B1Q9Y662 390 aa11.85□□□□□ -0.51
CASC4-202ENST00000345795 GGT3PA6NGU5 568 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 RFPL3SP0C7P2 107 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 MFSD13AQ14CX5 517 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 BCL2A1Q16548 175 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 CEACAM16Q2WEN9 425 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 CDCP2Q5VXM1 449 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 MEX3BQ6ZN04 569 aaKnown RBP11.84□□□□□ -0.51
CASC4-202ENST00000345795 DNASE2BQ8WZ79 361 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 TMEM59Q9BXS4 323 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 POTEKPQ9BYX7 375 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 IL17BQ9UHF5 180 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 SIGLEC5O15389 551 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 UPK3AO75631 287 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 ACSM4P0C7M7 580 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 HRH1P35367 487 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 SEC61A1P61619 476 aaKnown RBP11.84□□□□□ -0.51
CASC4-202ENST00000345795 EFNB1P98172 346 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 SIGLEC14Q08ET2 396 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 GRK1Q15835 563 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 CHRFAM7AQ494W8 412 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 WDR74Q6RFH5 385 aaPredicted RBP11.84□□□□□ -0.51
CASC4-202ENST00000345795 DEFB124Q8NES8 71 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 FNDC9Q8TBE3 224 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 NXF2Q9GZY0 626 aaKnown RBP11.84□□□□□ -0.51
CASC4-202ENST00000345795 F5H0A9 414 aaPredicted RBP11.84□□□□□ -0.51
CASC4-202ENST00000345795 FARS2O95363 451 aaKnown RBP11.84□□□□□ -0.51
CASC4-202ENST00000345795 GABRA4P48169 554 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 PMP22Q01453 160 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 CDK10Q15131 360 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 IGFBP7Q16270 282 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 LTC4SQ16873 150 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 ACER2Q5QJU3 275 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 SLC25A30Q5SVS4 291 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 C6orf15Q6UXA7 325 aaPredicted RBP11.84□□□□□ -0.51
CASC4-202ENST00000345795 MOB3CQ70IA8 216 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 FJX1Q86VR8 437 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 OR11H7Q8NGC8 314 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 HAVCR2Q8TDQ0 301 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 PILRBQ9UKJ0 227 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 PLCE1Q9P212 2302 aa11.84□□□□□ -0.51
CASC4-202ENST00000345795 LOC100289279A0A1B0GTE1 492 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 ANKUB1A6NFN9 424 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 TRIM64BA6NI03 449 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 A6NLC8 198 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 OR2AT4A6NND4 320 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 MS4A18H0YCH9 400 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 GPR171O14626 319 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 ZNF432O94892 652 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 DEFA5Q01523 94 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 SHBQ15464 509 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 MS4A18Q3C1V0 323 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 FAM122BQ7Z309 247 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 ELP5Q8TE02 316 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 WDFY2Q96P53 400 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 TWSG1Q9GZX9 223 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 EHFQ9NZC4 300 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 ABI3Q9P2A4 366 aa11.83□□□□□ -0.51
CASC4-202ENST00000345795 A0A0A6YYH2 397 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 TMEM272A0A1B0GTI8 110 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 TMEM82A0PJX8 343 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 A6NJ64 397 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 RBMXL2O75526 392 aaKnown RBP11.83□□□□□ -0.52
CASC4-202ENST00000345795 AKAIN1P0CW23 69 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 CD34P28906 385 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 CDC20BQ86Y33 519 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 GALNT16Q8N428 558 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 SLC25A38Q96DW6 304 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 RAB3CQ96E17 227 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 HYLS1Q96M11 299 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 TIMP4Q99727 224 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 MRPS18AQ9NVS2 196 aaKnown RBP11.83□□□□□ -0.52
CASC4-202ENST00000345795 NOSIPQ9Y314 301 aaKnown RBP11.83□□□□□ -0.52
CASC4-202ENST00000345795 LNP1A1A4G5 178 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 BET1O15155 118 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 FADS1O60427 444 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 CELA3AP09093 270 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 FAM157BP0CG42 384 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 S100A1P23297 94 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 MAP2K6P52564 334 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 RPS11P62280 158 aaKnown RBP eCLIP11.83□□□□□ -0.52
CASC4-202ENST00000345795 TSC22D1Q15714 1073 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 PLCXD3Q63HM9 321 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 TMPPEQ6ZT21 453 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 LIX1LQ8IVB5 337 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 SMIM4Q8WVI0 70 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 ASB5Q8WWX0 329 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 BORCS8Q96FH0 119 aa11.83□□□□□ -0.52
CASC4-202ENST00000345795 CPNE2Q96FN4 548 aaPredicted RBP11.83□□□□□ -0.52
CASC4-202ENST00000345795 NAA11Q9BSU3 229 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms