RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 LRRN1Q6UXK5 716 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 TMPRSS11AQ6ZMR5 421 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 PLEKHG7Q6ZR37 379 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 KRT77Q7Z794 578 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 NANOGP1Q8N7R0 232 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 SLAMF6Q96DU3 332 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 MRPL48Q96GC5 212 aaKnown RBP11.92□□□□□ -0.5
TPM4-202ENST00000344824 MAP6Q96JE9 813 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 MNTQ99583 582 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 ZNF649Q9BS31 505 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 C1orf198Q9H425 327 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 SLCO1C1Q9NYB5 712 aa11.92□□□□□ -0.5
TPM4-202ENST00000344824 CR1P17927 2039 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 SETD2Q9BYW2 2564 aaPredicted RBP11.91□□□□□ -0.5
TPM4-202ENST00000344824 PNMA8CA0A1B0GUJ8 204 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 TRIM64CA6NLI5 447 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 OVOL3O00110 214 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 INMTO95050 263 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 RPP14O95059 124 aaKnown RBP11.91□□□□□ -0.5
TPM4-202ENST00000344824 IGHV4-39P01824 125 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 ZNF32P17041 273 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 WNT4P56705 351 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 SNRPD2P62316 118 aaKnown RBP11.91□□□□□ -0.5
TPM4-202ENST00000344824 ACTA2P62736 377 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 ACTG2P63267 376 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 DOC2BQ14184 412 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 PCK2Q16822 640 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 CLEC12BQ2HXU8 276 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 XAF1Q6GPH4 301 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 FAM220AQ7Z4H9 259 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 KLBQ86Z14 1044 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 YIPF7Q8N8F6 280 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 ST7LQ8TDW4 575 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 ASB17Q8WXJ9 295 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 RORBQ92753 470 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 C18orf12Q96KH6 178 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 CA10Q9NS85 328 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 ZNF224Q9NZL3 707 aa11.91□□□□□ -0.5
TPM4-202ENST00000344824 CAB39Q9Y376 341 aaPredicted RBP11.91□□□□□ -0.5
TPM4-202ENST00000344824 RTTNQ86VV8 2226 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 TMEM129A0AVI4 362 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 SSX4O60224 188 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 MT-ND5P03915 603 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 KRT8P05787 483 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 H2BFMP0C1H6 154 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 PSMB10P40306 273 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 GALK2Q01415 458 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 RAB35Q15286 201 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 SPHARQ15513 63 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 TAF13Q15543 124 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 C3orf36Q3SXR2 165 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 SLC36A2Q495M3 483 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 CDONQ4KMG0 1287 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 RNLSQ5VYX0 342 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 C11orf71Q6IPW1 123 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 ZNF774Q6NX45 483 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 TMEM53Q6P2H8 277 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 KCTD18Q6PI47 426 aaPredicted RBP11.9□□□□□ -0.5
TPM4-202ENST00000344824 PRSS57Q6UWY2 283 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 ZNF627Q7L945 461 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 ZNF367Q7RTV3 350 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 ZFP41Q8N8Y5 198 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 GJC3Q8NFK1 279 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 OR10S1Q8NGN2 331 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 OR52N1Q8NH53 320 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 AKR7LQ8NHP1 331 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 OR8B4Q96RC9 309 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 SMR3AQ99954 134 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 KRTAP3-3Q9BYR6 98 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 KRTAP3-2Q9BYR7 98 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 OR51B6Q9H340 312 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 GSX1Q9H4S2 264 aaPredicted RBP11.9□□□□□ -0.5
TPM4-202ENST00000344824 ELOVL3Q9HB03 270 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 ACOXLQ9NUZ1 547 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 B3GNT2Q9NY97 397 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 PLEK2Q9NYT0 353 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 MRM2Q9UI43 246 aaKnown RBP11.9□□□□□ -0.5
TPM4-202ENST00000344824 LSM2Q9Y333 95 aaKnown RBP11.9□□□□□ -0.5
TPM4-202ENST00000344824 GRIP1Q9Y3R0 1128 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 PMF1-BGLAPU3KQ54 211 aa11.9□□□□□ -0.5
TPM4-202ENST00000344824 METTL15A6NJ78 407 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 DOK2O60496 412 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 TFAP2AP05549 437 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 INHBBP09529 407 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 BMP4P12644 408 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 PAX1P15863 534 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 ZNF14P17017 642 aaPredicted RBP11.89□□□□□ -0.51
TPM4-202ENST00000344824 PCBD1P61457 104 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 EGR3Q06889 387 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 SCRN3Q0VDG4 424 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 TIGD6Q17RP2 521 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 NRN1LQ496H8 165 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 CCDC92Q53HC0 331 aaPredicted RBP11.89□□□□□ -0.51
TPM4-202ENST00000344824 UBE2UQ5VVX9 321 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 Q71RC1 249 aaPredicted RBP11.89□□□□□ -0.51
TPM4-202ENST00000344824 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.89□□□□□ -0.51
TPM4-202ENST00000344824 CIARTQ8N365 385 aaPredicted RBP11.89□□□□□ -0.51
TPM4-202ENST00000344824 FAM169BQ8N8A8 192 aa11.89□□□□□ -0.51
TPM4-202ENST00000344824 FCGR1BQ92637 280 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms