RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ACSM4P0C7M7 580 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 IRF2P14316 349 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 ATP6V1B2P21281 511 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 PRTN3P24158 256 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 MDH2P40926 338 aaKnown RBP10.44□□□□□ -0.74
SGCA-202ENST00000344627 SLC6A9P48067 706 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 BPIFB3P59826 476 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 TRAP1Q12931 704 aaKnown RBP10.44□□□□□ -0.74
SGCA-202ENST00000344627 PPP1R8Q12972 351 aaKnown RBP10.44□□□□□ -0.74
SGCA-202ENST00000344627 ZMYND11Q15326 602 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 TAF13Q15543 124 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 ESCO2Q56NI9 601 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 ARMCX4Q5H9R4 360 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 RPL13AP3Q6NVV1 102 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 MRPL21Q7Z2W9 205 aaKnown RBP10.44□□□□□ -0.74
SGCA-202ENST00000344627 NAA40Q86UY6 237 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 ZBTB46Q86UZ6 589 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 MOGAT3Q86VF5 341 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 LINC00471Q8N535 108 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 ZDHHC22Q8N966 263 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 AQP11Q8NBQ7 271 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 OR51L1Q8NGJ5 315 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 OR2T4Q8NH00 348 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 SPRYD4Q8WW59 207 aaPredicted RBP10.44□□□□□ -0.74
SGCA-202ENST00000344627 DVL3Q92997 716 aaPredicted RBP10.44□□□□□ -0.74
SGCA-202ENST00000344627 SPTSSAQ969W0 71 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 SLCO4A1Q96BD0 722 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 SLC6A7Q99884 636 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 TSSK6Q9BXA6 273 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 PATZ1Q9HBE1 687 aaKnown RBP10.44□□□□□ -0.74
SGCA-202ENST00000344627 OPN4Q9UHM6 478 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 CYB5R1Q9UHQ9 305 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 LYVE1Q9Y5Y7 322 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 AUP1Q9Y679 476 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 CDH10Q9Y6N8 788 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 U3KQV3 271 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 LRRC30A6NM36 301 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 IQCF6A8MYZ5 107 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 GASTP01350 101 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 HLA-DPB1P04440 258 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 ZNF12P17014 697 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 GGT2P36268 569 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 RPS27P42677 84 aaKnown RBP10.43□□□□□ -0.74
SGCA-202ENST00000344627 MTNR1AP48039 350 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 MMP16P51512 607 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 RAD23AP54725 363 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 IL13RA1P78552 427 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 RSPO1Q2MKA7 263 aaPredicted RBP10.43□□□□□ -0.74
SGCA-202ENST00000344627 FAM98BQ52LJ0 330 aaKnown RBP10.43□□□□□ -0.74
SGCA-202ENST00000344627 PGAP1Q75T13 922 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 DHFR2Q86XF0 187 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 FITM2Q8N6M3 262 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 OR9Q1Q8NGQ5 310 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 SLC25A28Q96A46 364 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 OTULINQ96BN8 352 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 LRGUKQ96M69 825 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 CCT8L2Q96SF2 557 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 SLC30A2Q9BRI3 323 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 BTBD10Q9BSF8 475 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 C1QTNF5Q9BXJ0 243 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 MMP26Q9NRE1 261 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 CENPMQ9NSP4 180 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 MRPL22Q9NWU5 206 aaKnown RBP10.43□□□□□ -0.74
SGCA-202ENST00000344627 LRCH1Q9Y2L9 728 aa10.43□□□□□ -0.74
SGCA-202ENST00000344627 SAMHD1Q9Y3Z3 626 aaKnown RBP10.43□□□□□ -0.74
SGCA-202ENST00000344627 A0A1B0GUS0 222 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 GGT3PA6NGU5 568 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 CEACAM18A8MTB9 384 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 TRAPPC2LH3BP13 241 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 M0R135 149 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 MLNRO43193 412 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 SOX14O95416 240 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 SPARCP09486 303 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 RPS2P15880 293 aaKnown RBP10.42□□□□□ -0.74
SGCA-202ENST00000344627 HMGA2P52926 109 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 SEC61A1P61619 476 aaKnown RBP10.42□□□□□ -0.74
SGCA-202ENST00000344627 ZNF154Q13106 437 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 GK2Q14410 553 aaPredicted RBP10.42□□□□□ -0.74
SGCA-202ENST00000344627 OR8G1Q15617 311 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 LRRN1Q6UXK5 716 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 C9orf139Q6ZV77 190 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 C1orf87Q8N0U7 546 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 SLC37A3Q8NCC5 494 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 ZNF799Q96GE5 643 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 SIGLEC11Q96RL6 698 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 COPS4Q9BT78 406 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 TRIM15Q9C019 465 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 SLITRK2Q9H156 845 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 REEP1Q9H902 201 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 UFSP2Q9NUQ7 469 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 IL20Q9NYY1 176 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 OR5V1Q9UGF6 321 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 KCNG2Q9UJ96 466 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 INSIG2Q9Y5U4 225 aa10.42□□□□□ -0.74
SGCA-202ENST00000344627 BHLHE40O14503 412 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 IFNGP01579 166 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 GYPBP06028 91 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 RNASE1P07998 156 aaKnown RBP10.41□□□□□ -0.74
SGCA-202ENST00000344627 FMO3P31513 532 aa10.41□□□□□ -0.74
SGCA-202ENST00000344627 PRKXP51817 358 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms