RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 OR9A4Q8NGU2 314 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 ANKRD9Q96BM1 317 aaPredicted RBP13.3□□□□□ -0.28
CLCN1-201ENST00000343257 FGGYQ96C11 551 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 TMEM41AQ96HV5 264 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 TEX101Q9BY14 249 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SLC5A7Q9GZV3 580 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 FGF22Q9HCT0 170 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 MMP25Q9NPA2 562 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 LSM5Q9Y4Y9 91 aaKnown RBP13.3□□□□□ -0.28
CLCN1-201ENST00000343257 COL4A6Q14031 1691 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 ZNF727A8MUV8 499 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 CYR61O00622 381 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 PPIHO43447 177 aaKnown RBP13.3□□□□□ -0.28
CLCN1-201ENST00000343257 WISP1O95388 367 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 GLRA1P23415 457 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SGCGQ13326 291 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 PRSS54Q6PEW0 395 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 TMEM184AQ6ZMB5 413 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SSX9Q7RTT3 188 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 ZNF101Q8IZC7 436 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 ZDHHC22Q8N966 263 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 FAM3CQ92520 227 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 RERGQ96A58 199 aaPredicted RBP13.3□□□□□ -0.28
CLCN1-201ENST00000343257 RAB3CQ96E17 227 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SLCO5A1Q9H2Y9 848 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SLC17A5Q9NRA2 495 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 SLC2A8Q9NY64 477 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 TIMM10BQ9Y5J6 103 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 TMEM14AQ9Y6G1 99 aa13.3□□□□□ -0.28
CLCN1-201ENST00000343257 LOC107986453A0A1B0GWG9 222 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 UMAD1C9J7I0 102 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 LILRB3O75022 631 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 ADH1AP07327 375 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 GDI1P31150 447 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 EGR4Q05215 589 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 VITQ6UXI7 678 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 PRR22Q8IZ63 422 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 LRRC75AQ8NAA5 344 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 OR52N4Q8NGI2 321 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 OR10D4PQ8NGN7 298 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 PATE1Q8WXA2 126 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 TAAR8Q969N4 342 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 NMES1Q9C002 83 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 C5orf66Q9H5L9 145 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 GDE1Q9NZC3 331 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 LRP12Q9Y561 859 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 KPTNQ9Y664 436 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 FANCMQ8IYD8 2048 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 NUDT14O95848 222 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 NDUFB7P17568 137 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 HTR5AP47898 357 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 RIDAP52758 137 aaKnown RBP13.29□□□□□ -0.28
CLCN1-201ENST00000343257 COL19A1Q14993 1142 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 FAM78AQ5JUQ0 283 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 EEF1A1P5Q5VTE0 462 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 CDCP2Q5VXM1 449 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 TMEM230Q96A57 120 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 BANF2Q9H503 90 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLCN1-201ENST00000343257 HIF3AQ9Y2N7 669 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 DMRT1Q9Y5R6 373 aa13.29□□□□□ -0.28
CLCN1-201ENST00000343257 CSTBP04080 98 aaKnown RBP13.28□□□□□ -0.28
CLCN1-201ENST00000343257 CX3CR1P49238 355 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 UNC119Q13432 240 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 GKN2Q86XP6 184 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 METTL21AQ8WXB1 218 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 AQP3Q92482 292 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 TSACCQ96A04 125 aaPredicted RBP13.28□□□□□ -0.28
CLCN1-201ENST00000343257 SAT2Q96F10 170 aaPredicted RBP13.28□□□□□ -0.28
CLCN1-201ENST00000343257 ABHD6Q9BV23 337 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 SLC5A6Q9Y289 635 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 PRH1P02810 166 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 S1PR1P21453 382 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 S100A2P29034 98 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 CYCSP99999 105 aaKnown RBP13.28□□□□□ -0.28
CLCN1-201ENST00000343257 GUK1Q16774 197 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 GFI1BQ5VTD9 330 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 SLC18B1Q6NT16 456 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 FIP1L1Q6UN15 594 aaKnown RBP13.28□□□□□ -0.28
CLCN1-201ENST00000343257 SLC43A2Q8N370 569 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 BSCL2Q96G97 398 aaPredicted RBP13.28□□□□□ -0.28
CLCN1-201ENST00000343257 TGM7Q96PF1 710 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 ST6GALNAC5Q9BVH7 336 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 ZBP1Q9H171 429 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 MRPL22Q9NWU5 206 aaKnown RBP13.28□□□□□ -0.28
CLCN1-201ENST00000343257 FBXL17Q9UF56 701 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 FLVCR1Q9Y5Y0 555 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 ASCC3Q8N3C0 2202 aaKnown RBP13.28□□□□□ -0.28
CLCN1-201ENST00000343257 A0A1W2PP11 408 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 FAM157AC9JC47 383 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 SMIM10L1P0DMW3 83 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 PPP1CAP62136 330 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 BTG2P78543 158 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 CA13Q8N1Q1 262 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 BCORP1Q8N888 145 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 OR14C36Q8NHC7 312 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 SMIM10Q96HG1 83 aa13.28□□□□□ -0.28
CLCN1-201ENST00000343257 Q9N2J8 555 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms