RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TSEN54Q7Z6J9 526 aaKnown RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 SVBPQ8N300 66 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 OR13F1Q8NGS4 319 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 C19orf43Q9BQ61 176 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 NARFLQ9H6Q4 476 aa13.58□□□□□ -0.24
UBE3B-202ENST00000342494 N4BP2Q86UW6 1770 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-202ENST00000342494 IGHV1OR21-1A0A087WYE8 117 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 KLK8O60259 260 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 OR5G3P0C626 314 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 LIPAP38571 399 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 GSG1Q2KHT4 349 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 APOBEC3DQ96AK3 386 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-202ENST00000342494 MTCH1Q9NZJ7 389 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 DDX60Q8IY21 1712 aaKnown RBP13.57□□□□□ -0.24
UBE3B-202ENST00000342494 SSPNQ14714 243 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 OR2I1PQ8NGU4 316 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 OR1L3Q8NH93 324 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 RNF141Q8WVD5 230 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 ZNF816-ZNF321PA0A0X1KG74 233 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 TERTO14746 1132 aaKnown RBP13.57□□□□□ -0.24
UBE3B-202ENST00000342494 ZNF85Q03923 595 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 ACER2Q5QJU3 275 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 TMEM211Q6ICI0 200 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 KIRREL2Q6UWL6 708 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 VN1R1Q9GZP7 353 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 TMEM200CA6NKL6 621 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 NUPL2O15504 423 aaKnown RBP13.57□□□□□ -0.24
UBE3B-202ENST00000342494 RAB1AP62820 205 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 SOHLH1Q5JUK2 328 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 TMEM92Q6UXU6 159 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 NOXO1Q8NFA2 376 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 ST8SIA4Q92187 359 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 SLC25A37Q9NYZ2 338 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 PLCH1Q4KWH8 1693 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 TRGV10A0A0A0MS01 117 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 ZNF26P17031 533 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-202ENST00000342494 EDARADDQ8WWZ3 215 aa13.57□□□□□ -0.24
UBE3B-202ENST00000342494 LIN7CQ9NUP9 197 aaKnown RBP13.57□□□□□ -0.24
UBE3B-202ENST00000342494 C20orf202A1L168 122 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 ZNF83P51522 516 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 SLC17A1Q14916 467 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 SYT6Q5T7P8 510 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-202ENST00000342494 ANKRD53Q8N9V6 530 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 BTF3L4Q96K17 158 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 FYTTD1Q96QD9 318 aaKnown RBP13.56□□□□□ -0.24
UBE3B-202ENST00000342494 CHST2Q9Y4C5 530 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 ALS2Q96Q42 1657 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 A0A0A6YYD5 115 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 OR2A25A4D2G3 310 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 SULT1C4O75897 302 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 ZNF121P58317 390 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-202ENST00000342494 OTPQ5XKR4 325 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 ADGRG3Q86Y34 549 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 MITD1Q8WV92 249 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 TMEM230Q96A57 120 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 IGHV5-51A0A0C4DH38 117 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 ZFP92A6NM28 416 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 ABCD3P28288 659 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 NXPH1P58417 271 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 RNPS1Q15287 305 aaKnown RBP13.56□□□□□ -0.24
UBE3B-202ENST00000342494 SPANXN5Q5MJ07 72 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 LYPD8Q6UX82 237 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 OR13C8Q8NGS7 320 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 SEC22CQ9BRL7 303 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 SPNS1Q9H2V7 528 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 SLC22A13Q9Y226 551 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 A0A087WUJ7 227 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 GPR37O15354 613 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 SRP14P37108 136 aaKnown RBP13.56□□□□□ -0.24
UBE3B-202ENST00000342494 UBE2IP63279 158 aaKnown RBP13.56□□□□□ -0.24
UBE3B-202ENST00000342494 TPBGQ13641 420 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 SYS1Q8N2H4 156 aa13.56□□□□□ -0.24
UBE3B-202ENST00000342494 PATZ1Q9HBE1 687 aaKnown RBP13.56□□□□□ -0.24
UBE3B-202ENST00000342494 TMEM235A6NFC5 223 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 HSPB2A8KAH6 182 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 HSPB2Q16082 182 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 OR2Z1Q8NG97 314 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 OR10G3Q8NGC4 313 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 TRMT61AQ96FX7 289 aaKnown RBP13.55□□□□□ -0.24
UBE3B-202ENST00000342494 ZNF251Q9BRH9 671 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 C11orf54Q9H0W9 315 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-202ENST00000342494 ONECUT1Q9UBC0 465 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 AIPO00170 330 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 TXNL1O43396 289 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 PAX6P26367 422 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 MOB3BQ86TA1 216 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 KIAA1958Q8N8K9 716 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 OR2G3Q8NGZ4 309 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 ST3GAL6Q9Y274 331 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 PKD1L3Q7Z443 1732 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 SHISA8B8ZZ34 492 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 CDAP32320 146 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 SOX18P35713 384 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 B4GALNT1Q00973 533 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 SLC36A1Q7Z2H8 476 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 GNRHR2Q96P88 292 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 GON7Q9BXV9 100 aa13.55□□□□□ -0.24
UBE3B-202ENST00000342494 RGPD1P0DJD0 1748 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms