RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 WNT11O96014 354 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 EGR3Q06889 387 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 RHEBQ15382 184 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 SP6Q3SY56 376 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 AVPI1Q5T686 147 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 CLEC9AQ6UXN8 241 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 FBXW12Q6X9E4 464 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 OR56B1Q8NGI3 324 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 NICN1Q9BSH3 213 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 NUDT9Q9BW91 350 aa11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF223Q9UK11 482 aaPredicted RBP11.19□□□□□ -0.62
SNRNP48-201ENST00000342415 OR4C45A6NMZ5 311 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 GUSBP08236 651 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 NMBP08949 121 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 ASCL1P50553 236 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 RPS18P62269 152 aaKnown RBP11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 TAF9Q16594 264 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 MANEAQ5SRI9 462 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 FAM199XQ6PEV8 388 aaPredicted RBP11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 OR52N4Q8NGI2 321 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 OR10A2Q9H208 303 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 HAO2Q9NYQ3 351 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 CTSFQ9UBX1 484 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 ABCA7Q8IZY2 2146 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 IGHV5-51A0A0C4DH38 117 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 IL9P15248 144 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 FAM181AQ8N9Y4 354 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 CLRN3Q8NCR9 226 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 ULBP2Q9BZM5 246 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 SLC25A32Q9H2D1 315 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 NR2C1P13056 603 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 C17orf67Q0P5P2 114 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 PDZD11Q5EBL8 140 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 TMEM92Q6UXU6 159 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 NPSR1Q6W5P4 371 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 OR5L1Q8NGL2 311 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 OR14K1Q8NGZ2 314 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 OR14L1PQ8NHC6 308 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 TCEAL3Q969E4 200 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 CHRDQ9H2X0 955 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 TXNIPQ9H3M7 391 aa11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 C8orf33Q9H7E9 229 aaPredicted RBP11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 C19orf25Q9UFG5 118 aaPredicted RBP11.18□□□□□ -0.62
SNRNP48-201ENST00000342415 IGHV3-15A0A0B4J1V0 119 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 ELAVL1Q15717 326 aaKnown RBP11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 BRICD5Q6PL45 260 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 LYG2Q86SG7 212 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF695Q8IW36 515 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 GPR137CQ8N3F9 429 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 SPICQ8N5J4 248 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 SECTM1Q8WVN6 248 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 PNPLA2Q96AD5 504 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 SYT3Q9BQG1 590 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 IGHV3-64DA0A0J9YX35 117 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 TLCD2A6NGC4 264 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 DPP4P27487 766 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 H2BFSP57053 126 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 KISS1RQ969F8 398 aaPredicted RBP11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 VSTM2LQ96N03 204 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 PBDC1Q9BVG4 233 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 SLC19A3Q9BZV2 496 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 TMEM200CA6NKL6 621 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 H0YIG0 161 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 CDK2AP1O14519 115 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 ANGPTL7O43827 346 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 CT45A8P0DMV1 189 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 CT45A9P0DMV2 189 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 CSF2RBP32927 897 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 CT45A2Q5DJT8 189 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 ELFN2Q5R3F8 820 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 SLC43A2Q8N370 569 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 GLYATL2Q8WU03 294 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 ARL5BQ96KC2 179 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 OR6C1Q96RD1 312 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 RSPO3Q9BXY4 272 aaPredicted RBP11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 CNTNAP3Q9BZ76 1288 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 OR6C65A6NJZ3 312 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 LRP3O75074 770 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 QDPRP09417 244 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 THBS2P35442 1172 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 DCAF7P61962 342 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 MRPS21P82921 87 aaKnown RBP11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 MFGE8Q08431 387 aaPredicted RBP11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 Q6ZRG5 221 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 NKAIN3Q8N8D7 197 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 BVESQ8NE79 360 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF764Q96H86 408 aaPredicted RBP11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 FANCFQ9NPI8 374 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 SLC22A11Q9NSA0 550 aa11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 PURGQ9UJV8 347 aaKnown RBP11.17□□□□□ -0.62
SNRNP48-201ENST00000342415 BCL2L11O43521 198 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 ITGB2P05107 769 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 OTX2P32243 289 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 ZP1P60852 638 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 MFAP5Q13361 173 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 IL10RAQ13651 578 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 STPG2Q8N412 459 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 NUBPLQ8TB37 319 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 NANPQ8TBE9 248 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms