RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 DDX28Q9NUL7 540 aaKnown RBP11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 MRPL22Q9NWU5 206 aaKnown RBP11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 TMEFF2Q9UIK5 374 aaPredicted RBP11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 ATRQ13535 2644 aa11.31□□□□□ -0.6
SIRPB3P-201ENST00000340424 TRAV20A0A0B4J274 112 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 TCRBV3S1A0A5B6 114 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 MAGEA13PA6NCF6 341 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 F5H5K5 113 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 H3BN98 237 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 CASQ2O14958 399 aaPredicted RBP11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 E2F6O75461 281 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 SOX14O95416 240 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 MSMBP08118 114 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 ACSM4P0C7M7 580 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 PAICSP22234 425 aaKnown RBP11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 GRK5P34947 590 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 ENTPD1P49961 510 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 LMO4P61968 165 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 MALLQ13021 153 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 CRMP1Q14194 572 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 PCK2Q16822 640 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 TEX30Q5JUR7 227 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 SPATA24Q86W54 205 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 LINC00346Q8IVM7 164 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 PAPD5Q8NDF8 572 aaKnown RBP11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR8G5Q8NG78 346 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR2Z1Q8NG97 314 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR13G1Q8NGZ3 307 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR4Q3Q8NH05 313 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 TMEM186Q96B77 213 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 NIPSNAP1Q9BPW8 284 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 TEX12Q9BXU0 123 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 VCX3BQ9H321 246 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 NARFLQ9H6Q4 476 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 ARMC1Q9NVT9 282 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 DNAJB9Q9UBS3 223 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 POMPQ9Y244 141 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 NOP16Q9Y3C1 178 aaKnown RBP11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 WIPI2Q9Y4P8 454 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 COMMD3-BMI1R4GMX3 469 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 TANC2Q9HCD6 1990 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 MXRA5Q9NR99 2828 aa11.3□□□□□ -0.6
SIRPB3P-201ENST00000340424 IQCF6A8MYZ5 107 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 M0R135 149 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 ANXA8P13928 327 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 SPI1P17947 270 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 PYCR1P32322 319 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 MVKQ03426 396 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 SCGB2A2Q13296 93 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 RSPO1Q2MKA7 263 aaPredicted RBP11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 ACSM5Q6NUN0 579 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 DRAM2Q6UX65 266 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 Q6ZR03 302 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZNF283Q8N7M2 679 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 NRBF2Q96F24 287 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZNF799Q96GE5 643 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 MAP6Q96JE9 813 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 FAM192AQ9GZU8 254 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 S100A14Q9HCY8 104 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 TREM2Q9NZC2 230 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 PTTG3PQ9NZH4 202 aa11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 PDP1Q9P0J1 537 aaPredicted RBP11.29□□□□□ -0.6
SIRPB3P-201ENST00000340424 FBN1P35555 2871 aaKnown RBP11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 A0A1B0GWJ7 208 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 DPPA5A6NC42 116 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 FAM157AC9JC47 383 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 ZNF878C9JN71 531 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 WNT9BO14905 357 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 IGHV2-5P01817 119 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 LCATP04180 440 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 HMGN1P05114 100 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 CPT2P23786 658 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 SLC15A1P46059 708 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 SRP9P49458 86 aaKnown RBP11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 HLXQ14774 488 aaPredicted RBP11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 AVPI1Q5T686 147 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 C1orf146Q5VVC0 180 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR2T2Q6IF00 324 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 RHOUQ7L0Q8 258 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 SPICQ8N5J4 248 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 ATG16L2Q8NAA4 619 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR9Q1Q8NGQ5 310 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR6K6Q8NGW6 343 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 TMEM158Q8WZ71 300 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 OR2V2Q96R30 315 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 GAL3ST1Q99999 423 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 SLC30A2Q9BRI3 323 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 SLC22A4Q9H015 551 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 TOR3AQ9H497 397 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 OPA3Q9H6K4 179 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 TMEM106BQ9NUM4 274 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 HIF1ANQ9NWT6 349 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 SCOCQ9UIL1 159 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 PPP1R3CQ9UQK1 317 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 NPTNQ9Y639 398 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 CACNG2Q9Y698 323 aa11.28□□□□□ -0.6
SIRPB3P-201ENST00000340424 TVP23AA6NH52 213 aa11.27□□□□□ -0.61
SIRPB3P-201ENST00000340424 ZNF593O00488 134 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms