RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FOXD3Q9UJU5 478 aaPredicted RBP11.43□□□□□ -0.58
LIN54-201ENST00000340417 ADAM5Q6NVV9 412 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 DGAT2L6Q6ZPD8 337 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 SLC25A26Q70HW3 274 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 OR4A16Q8NH70 328 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 PAQR8Q8TEZ7 354 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 FUNDC2Q9BWH2 189 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 LPAR2Q9HBW0 351 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 CSF1P09603 554 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 ATP5J2P56134 94 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 P2RY6Q15077 328 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 SFRP4Q6FHJ7 346 aaPredicted RBP11.43□□□□□ -0.58
LIN54-201ENST00000340417 PFDN2Q9UHV9 154 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 A0A0A6YYH2 397 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 A6NJ64 397 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 TERTO14746 1132 aaKnown RBP11.43□□□□□ -0.58
LIN54-201ENST00000340417 HOXA1P49639 335 aaPredicted RBP11.43□□□□□ -0.58
LIN54-201ENST00000340417 CLDN12P56749 244 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 CLDN20P56880 219 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 S100A7AQ86SG5 101 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 SFXN3Q9BWM7 321 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 FLRT3Q9NZU0 649 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 HLA-DMAP28067 261 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 SLC17A1Q14916 467 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 ENTHD1Q8IYW4 607 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 SIGLEC11Q96RL6 698 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 BANF2Q9H503 90 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 CGGBP1Q9UFW8 167 aaPredicted RBP11.43□□□□□ -0.58
LIN54-201ENST00000340417 TINAGQ9UJW2 476 aa11.43□□□□□ -0.58
LIN54-201ENST00000340417 ZSCAN5BA6NJL1 495 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 NTN3O00634 580 aaPredicted RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 CAPNS1P04632 268 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 GPR6P46095 362 aaPredicted RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 LIMK1P53667 647 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 NCS1P62166 190 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 GNG3P63215 75 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 SLC25A35Q3KQZ1 300 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 ZNF420Q8TAQ5 688 aaPredicted RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 GLYATL2Q8WU03 294 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 RLFQ13129 1914 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 DNPH1O43598 174 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 PPP5CP53041 499 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 MEF2DQ14814 521 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 TBRG1Q3YBR2 411 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 OR51E2Q9H255 320 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 ADAM20O43506 726 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 AKAIN1P0CW23 69 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 SNRPGP62308 76 aaKnown RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 OR6M1Q8NGM8 313 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 TRIM63Q969Q1 353 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 ZNF681Q96N22 645 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 S1PR3Q99500 378 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 AKIRIN1Q9H9L7 192 aaPredicted RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 CISD1Q9NZ45 108 aaKnown RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 TREM2Q9NZC2 230 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 PPP1R3CQ9UQK1 317 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 RER1O15258 196 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 BCAS1O75363 584 aaPredicted RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 GRK1Q15835 563 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 GSG1LQ6UXU4 331 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 ISOC1Q96CN7 298 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 MRPS24Q96EL2 167 aaKnown RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 PDCD1LG2Q9BQ51 273 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 CHODLQ9H9P2 273 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 GPR35Q9HC97 309 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 SLC6A13Q9NSD5 602 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 SCN3AQ9NY46 2000 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 SMAD7O15105 426 aaKnown RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 GABRA5P31644 462 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 FUT6P51993 359 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 SKP2Q13309 424 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 ZFP69Q49AA0 526 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 KDM4DQ6B0I6 523 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 ADGRG3Q86Y34 549 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 OR10J5Q8NHC4 309 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 LRRC29Q8WV35 223 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 ZNF471Q9BX82 626 aaPredicted RBP11.42□□□□□ -0.58
LIN54-201ENST00000340417 ABCG5Q9H222 651 aa11.42□□□□□ -0.58
LIN54-201ENST00000340417 ZNF45Q02386 682 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 CAMK2BQ13554 666 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 JAM3Q9BX67 310 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 CXXC4Q9H2H0 198 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 PLPPR5Q32ZL2 321 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 EIF5AL1Q6IS14 154 aaKnown RBP11.41□□□□□ -0.58
LIN54-201ENST00000340417 PLXDC2Q6UX71 529 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 OR52N1Q8NH53 320 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 PLEKHA3Q9HB20 300 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 MIA3Q5JRA6 1907 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 TRAV38-1A0A0B4J264 116 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 C3orf80F5H4A9 247 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 NTN1O95631 604 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 PPP3CBP16298 524 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 TAS2R31P59538 309 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 DESI1Q6ICB0 168 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 TEX29Q8N6K0 151 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 RAB40AQ8WXH6 277 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 SLAMF9Q96A28 289 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 KIRREL1Q96J84 757 aa11.41□□□□□ -0.58
LIN54-201ENST00000340417 RAB22AQ9UL26 194 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms