RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 NPIPA7E9PJI5 369 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 H7C4K7 107 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 C1QL1O75973 258 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 KNG1P01042 644 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 ITGB2P05107 769 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 NPIPA8P0DM63 369 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 PMS2P11Q13670 270 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 LHX8Q68G74 356 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 ZNF417Q8TAU3 575 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 MARCH1Q8TCQ1 289 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 HAS2Q92819 552 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 CDCA3Q99618 268 aaPredicted RBP8.37□□□□□ -1.07
RPGR-202ENST00000339363 MESP1Q9BRJ9 268 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 MENTQ9BUN1 341 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 PRODH2Q9UF12 536 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 POMT1Q9Y6A1 747 aa8.37□□□□□ -1.07
RPGR-202ENST00000339363 MDC1Q14676 2089 aaKnown RBP8.37□□□□□ -1.07
RPGR-202ENST00000339363 PRSS47A8MTI9 375 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 PEX12O00623 359 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 RRP8O43159 456 aaKnown RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 CD5P06127 495 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 FAM157CP0CG43 387 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 POLR2HP52434 150 aaKnown RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 PAX5Q02548 391 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 HERPUD1Q15011 391 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 IQCJQ1A5X6 159 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 TFGQ92734 400 aaPredicted RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 R3HDM4Q96D70 268 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 SRA1Q9HD15 236 aaKnown RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 DNAJC4Q9NNZ3 241 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 PARP11Q9NR21 331 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 GPR173Q9NS66 373 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 ANKRD10Q9NXR5 420 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 RAB22AQ9UL26 194 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 CHD3Q12873 2000 aaKnown RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 ZFHX4Q86UP3 3567 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 LOC102724200A0A096LPH7 203 aaPredicted RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 A0A1B0GTH9 108 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 A0A1W2PPV9 198 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 DUXAA6NLW8 204 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 J3QRE1 110 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 JTBO76095 146 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 IL33O95760 270 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 CD82P27701 267 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 RPL12P30050 165 aaKnown RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 OR3A2P47893 321 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 DNASE1L1P49184 302 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 CCR4P51679 360 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 CLDN6P56747 220 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 SQSTM1Q13501 440 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 NKAIN1Q4KMZ8 207 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 LY6G5CQ5SRR4 150 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 SLC25A24Q6NUK1 477 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 ANKRD16Q6P6B7 361 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 PSRC1Q6PGN9 363 aaPredicted RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 DEGS2Q6QHC5 323 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 TRAPPC6BQ86SZ2 158 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 OR2L3Q8NG85 312 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 OR6N2Q8NGY6 317 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 LCN9Q8WX39 176 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 FRZBQ92765 325 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 DIO2Q92813 273 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 KISS1RQ969F8 398 aaPredicted RBP8.36□□□□□ -1.07
RPGR-202ENST00000339363 NTNG2Q96CW9 530 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 GALNT14Q96FL9 552 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 Q96M85 177 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 HIST1H2BLQ99880 126 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 AIF1LQ9BQI0 150 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 EPHX3Q9H6B9 360 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 LMAN1LQ9HAT1 526 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 TMEM100Q9NV29 134 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 ICKQ9UPZ9 632 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 COL6A3P12111 3177 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 MASP2O00187 686 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 RAB27BO00194 218 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 CCL16O15467 120 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 RAMP1O60894 148 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 METTL15P1P0C7V9 234 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 PMELP40967 661 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 FHITP49789 147 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 NPY4RP50391 375 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 TAS2R38P59533 333 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 PLAURQ03405 335 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 OTPQ5XKR4 325 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 RTL6Q6ICC9 239 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 SMIM15Q7Z3B0 74 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 CLEC1AQ8NC01 280 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 NUP43Q8NFH3 380 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 Q8WTZ3 238 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 OVCA2Q8WZ82 227 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 SMIM8Q96KF7 97 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 RXFP3Q9NSD7 469 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 RNF24Q9Y225 148 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 VSIG4Q9Y279 399 aa8.36□□□□□ -1.07
RPGR-202ENST00000339363 C9J4A7 227 aa8.35□□□□□ -1.07
RPGR-202ENST00000339363 H3BQ15 152 aa8.35□□□□□ -1.07
RPGR-202ENST00000339363 OGG1O15527 345 aa8.35□□□□□ -1.07
RPGR-202ENST00000339363 RPLP2P05387 115 aaKnown RBP8.35□□□□□ -1.07
RPGR-202ENST00000339363 FCGR3AP08637 254 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms