RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 COLCA1Q6ZS62 124 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 Q6ZSV7 163 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 TMPRSS11FQ6ZWK6 438 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 MBOAT2Q6ZWT7 520 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 ADCK1Q86TW2 530 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 ZSCAN4Q8NAM6 433 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-202ENST00000338325 LRTOMTQ8WZ04 291 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 LZICQ8WZA0 190 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 DPAGT1Q9H3H5 408 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 C16orf95Q9H693 158 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 FN3KRPQ9HA64 309 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 NMNAT1Q9HAN9 279 aaPredicted RBP9.51□□□□□ -0.89
CSMD2-202ENST00000338325 SMURF1Q9HCE7 757 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 RNF7Q9UBF6 113 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 LHFPL6Q9Y693 200 aa9.51□□□□□ -0.89
CSMD2-202ENST00000338325 LGALS8O00214 317 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 IMPA2O14732 288 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 FFAR1O14842 300 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 ADAM20O43506 726 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 NPPAP01160 153 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 GK2Q14410 553 aaPredicted RBP9.5□□□□□ -0.89
CSMD2-202ENST00000338325 MPPED2Q15777 294 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 MEP1BQ16820 701 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 COQ5Q5HYK3 327 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 GPR139Q6DWJ6 353 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 SFRP4Q6FHJ7 346 aaPredicted RBP9.5□□□□□ -0.89
CSMD2-202ENST00000338325 TBPL2Q6SJ96 375 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.5□□□□□ -0.89
CSMD2-202ENST00000338325 NUAK2Q9H093 628 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 TRIM36Q9NQ86 728 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 RPS6KA6Q9UK32 745 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 TMEM5Q9Y2B1 443 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 NOP16Q9Y3C1 178 aaKnown RBP9.5□□□□□ -0.89
CSMD2-202ENST00000338325 SNX13Q9Y5W8 968 aa9.5□□□□□ -0.89
CSMD2-202ENST00000338325 C5orf63A6NC05 138 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 C3orf80F5H4A9 247 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 SOCS2O14508 198 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 MRASO14807 208 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 NDUFA2O43678 99 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 NDUFB2O95178 105 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 CSF1P09603 554 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 ACSM4P0C7M7 580 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 CENPAP49450 140 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 ARF6P62330 175 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 COX10Q12887 443 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 MALLQ13021 153 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 OR8G1Q15617 311 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 OR8B8Q15620 311 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 RSPO1Q2MKA7 263 aaPredicted RBP9.49□□□□□ -0.89
CSMD2-202ENST00000338325 KRTAP27-1Q3LI81 207 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 DHRS7BQ6IAN0 325 aaPredicted RBP9.49□□□□□ -0.89
CSMD2-202ENST00000338325 DNM1P34Q6PK57 102 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 CORO6Q6QEF8 472 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 PTCHD4Q6ZW05 846 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 RRM2BQ7LG56 351 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 VTCN1Q7Z7D3 282 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 BOLLQ8N9W6 283 aaKnown RBP9.49□□□□□ -0.89
CSMD2-202ENST00000338325 OR2T12Q8NG77 320 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 SPRYD4Q8WW59 207 aaPredicted RBP9.49□□□□□ -0.89
CSMD2-202ENST00000338325 GPX7Q96SL4 187 aaPredicted RBP9.49□□□□□ -0.89
CSMD2-202ENST00000338325 NRIP3Q9NQ35 241 aa9.49□□□□□ -0.89
CSMD2-202ENST00000338325 TRAV38-1A0A0B4J264 116 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 A0A0G2JND7 137 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 OOEPA6NGQ2 149 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 BBIP1A8MTZ0 92 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 F5H5K5 113 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 PLXNB1O43157 2135 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 ALX3O95076 343 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 PTBP3O95758 552 aaKnown RBP9.48□□□□□ -0.89
CSMD2-202ENST00000338325 CRABP1P29762 137 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 C11orf91Q3C1V1 193 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 METTL21CQ5VZV1 264 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 PGAP1Q75T13 922 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 BTN2A1Q7KYR7 527 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 PDZD9Q8IXQ8 264 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 SLCO4A1Q96BD0 722 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 FAM46AQ96IP4 442 aaKnown RBP9.48□□□□□ -0.89
CSMD2-202ENST00000338325 SIKE1Q9BRV8 207 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 ADAT1Q9BUB4 502 aaKnown RBP9.48□□□□□ -0.89
CSMD2-202ENST00000338325 SLC22A4Q9H015 551 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 RASSF4Q9H2L5 321 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 SIGLEC7Q9Y286 467 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 FAM96BQ9Y3D0 163 aa9.48□□□□□ -0.89
CSMD2-202ENST00000338325 BTBD17A6NE02 478 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 G3V4G9 280 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 DCTN6O00399 190 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 OR10H3O60404 316 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 PTP4A3O75365 173 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 FCN3O75636 299 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 TSPAN9O75954 239 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 ECDO95905 644 aaPredicted RBP9.47□□□□□ -0.89
CSMD2-202ENST00000338325 GYPAP02724 150 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 LCATP04180 440 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 FBP1P09467 338 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 CA6P23280 308 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 CDKN2AP42771 156 aaKnown RBP9.47□□□□□ -0.89
CSMD2-202ENST00000338325 TRAP1Q12931 704 aaKnown RBP9.47□□□□□ -0.89
CSMD2-202ENST00000338325 ECH1Q13011 328 aa9.47□□□□□ -0.89
CSMD2-202ENST00000338325 IFI44LQ53G44 452 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms