RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NOP16Q9Y3C1 178 aaKnown RBP8.95□□□□□ -0.98
CAPN3-202ENST00000337571 IGLV1-36A0A0B4J1U3 117 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 IGHV3-64DA0A0J9YX35 117 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 A8MXK9 166 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 F5H0A9 414 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-202ENST00000337571 F5H5P2 479 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 H0YL77 283 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 DCTN6O00399 190 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 ARPC3O15145 178 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 RRP9O43818 475 aaKnown RBP8.94□□□□□ -0.98
CAPN3-202ENST00000337571 ZNF205O95201 554 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 FABP3P05413 133 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 HKR1P10072 659 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 HIST1H1CP16403 213 aaKnown RBP8.94□□□□□ -0.98
CAPN3-202ENST00000337571 CD80P33681 288 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 RBMXP38159 391 aaKnown RBP8.94□□□□□ -0.98
CAPN3-202ENST00000337571 FXYD6P3P58550 94 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 RELBQ01201 579 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 PAX8Q06710 450 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 HNRNPA0Q13151 305 aaKnown RBP8.94□□□□□ -0.98
CAPN3-202ENST00000337571 ZNF181Q2M3W8 571 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 SLC18B1Q6NT16 456 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 TREML4Q6UXN2 200 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 PGAP1Q75T13 922 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 DOK3Q7L591 496 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 MRPL21Q7Z2W9 205 aaKnown RBP8.94□□□□□ -0.98
CAPN3-202ENST00000337571 KLBQ86Z14 1044 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 LINC00346Q8IVM7 164 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 SLC26A10Q8NG04 563 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 OR8B3Q8NGG8 313 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 GNPDA2Q8TDQ7 276 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 RAB40AQ8WXH6 277 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 SPTSSAQ969W0 71 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 ERGIC1Q969X5 290 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 SLCO4A1Q96BD0 722 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 DHRS1Q96LJ7 313 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 NSMCE2Q96MF7 247 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 DUX5Q96PT3 197 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 OR8B2Q96RD0 313 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 C1QTNF5Q9BXJ0 243 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 FAM107BQ9H098 131 aa8.94□□□□□ -0.98
CAPN3-202ENST00000337571 MLNRO43193 412 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 KRT36O76013 467 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 FSTL3O95633 263 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 HLA-DPB1P04440 258 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 ACSM4P0C7M7 580 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 PPIAL4GP0DN37 164 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 RRM2P31350 389 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 GGT2P36268 569 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 MXRA7P84157 204 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 TRAP1Q12931 704 aaKnown RBP8.93□□□□□ -0.98
CAPN3-202ENST00000337571 GK2Q14410 553 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-202ENST00000337571 TAF13Q15543 124 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 OR8G1Q15617 311 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 KCNJ8Q15842 424 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 KLF17Q5JT82 389 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-202ENST00000337571 SAMD4BQ5PRF9 694 aaKnown RBP8.93□□□□□ -0.98
CAPN3-202ENST00000337571 SLC35F1Q5T1Q4 408 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 RPL13AP3Q6NVV1 102 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 SHISA2Q6UWI4 295 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 CFAP77Q6ZQR2 320 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 COLCA1Q6ZS62 124 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 ZBTB46Q86UZ6 589 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 BCL6BQ8N143 479 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-202ENST00000337571 FAM86B1Q8N7N1 296 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 CELF2-AS1Q8N7Q2 184 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 OR52L1Q8NGH7 329 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 TMEM246Q9BRR3 403 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 FUZQ9BT04 418 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 ZNF747Q9BV97 191 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 SLC22A4Q9H015 551 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 MYLK2Q9H1R3 596 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 KIF17Q9P2E2 1029 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 CLN8Q9UBY8 286 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 CYB5R1Q9UHQ9 305 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 KCNG2Q9UJ96 466 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 PCDHGB1Q9Y5G3 927 aa8.93□□□□□ -0.98
CAPN3-202ENST00000337571 IGHV3OR16-10A0A075B7F0 116 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 IGHV2-70DA0A0C4DH43 119 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 KIR2DS1A0A191URI9 304 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 OR6C68A6NDL8 312 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 GGT3PA6NGU5 568 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 DNAJC9-AS1A6NH13 148 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 HSD17B1P14061 328 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 EGR1P18146 543 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 MSX2P35548 267 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-202ENST00000337571 PITPNBP48739 271 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.92□□□□□ -0.98
CAPN3-202ENST00000337571 TSPAN31Q12999 210 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 RSPO1Q2MKA7 263 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-202ENST00000337571 ZNF404Q494X3 552 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 CD276Q5ZPR3 534 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 DCDC5Q6ZRR9 648 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 NAA40Q86UY6 237 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 PARP8Q8N3A8 854 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 LINC00471Q8N535 108 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 SDR9C7Q8NEX9 313 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 PROKR2Q8NFJ6 384 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 OR4C15Q8NGM1 316 aa8.92□□□□□ -0.98
CAPN3-202ENST00000337571 OR2T4Q8NH00 348 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms