RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 OR8G2PQ6IF36 304 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 LILRA6Q6PI73 481 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 KIAA1958Q8N8K9 716 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 ZBTB44Q8NCP5 570 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 POMT2Q9UKY4 750 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 MT-ND4LP03901 98 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 OR5H8P0DN80 308 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 CD300LDQ6UXZ3 194 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 Q6ZRG5 221 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 OR4A16Q8NH70 328 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 A0A087WZY1 265 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 P2RX3P56373 397 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 TMEM215Q68D42 235 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 PTCRAQ6ISU1 281 aaPredicted RBP12.44□□□□□ -0.42
RTN4-202ENST00000337526 LYG2Q86SG7 212 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 OR10J5Q8NHC4 309 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 FGF14Q92915 247 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 CCDC74AQ96AQ1 378 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 APH1AQ96BI3 265 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 OR8B4Q96RC9 309 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 NIT2Q9NQR4 276 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 SLC23A1Q9UHI7 598 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 FBXL4Q9UKA2 621 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 FAM221AA4D161 298 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 ARPC3O15145 178 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 SCGB1D1O95968 90 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
RTN4-202ENST00000337526 TMEM41BQ5BJD5 291 aa12.44□□□□□ -0.42
RTN4-202ENST00000337526 DAZAP1Q96EP5 407 aaKnown RBP12.44□□□□□ -0.42
RTN4-202ENST00000337526 TRBV5-3A0A0A0MS03 114 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 FRG2CA6NGY1 282 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 DEGS1O15121 323 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 IL5P05113 134 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 CTXN2P0C2S0 81 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 DMRTC1Q5HYR2 192 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 GLDNQ6ZMI3 551 aaPredicted RBP12.43□□□□□ -0.42
RTN4-202ENST00000337526 TMEM182Q6ZP80 229 aaPredicted RBP12.43□□□□□ -0.42
RTN4-202ENST00000337526 ZNF547Q8IVP9 402 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 OTOSQ8NHW6 89 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 GPR119Q8TDV5 335 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 C2CD4CQ8TF44 421 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 HS3ST1O14792 307 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 ADRA2CP18825 462 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 PSMB3P49720 205 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 AANATQ16613 207 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 KTI12Q96EK9 354 aaPredicted RBP12.43□□□□□ -0.42
RTN4-202ENST00000337526 MRGPRX3Q96LB0 322 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 PRELID3BQ9Y3B1 194 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 TIMM10BQ9Y5J6 103 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 HLA-HP01893 362 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 GSTP1P09211 210 aaKnown RBP12.43□□□□□ -0.42
RTN4-202ENST00000337526 FLI1Q01543 452 aaPredicted RBP12.43□□□□□ -0.42
RTN4-202ENST00000337526 BTF3L4Q96K17 158 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 DHRS9Q9BPW9 319 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 MARVELD1Q9BSK0 173 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 FAM234AQ9H0X4 552 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 MMP25Q9NPA2 562 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 SERGEFQ9UGK8 458 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 CCL27Q9Y4X3 112 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 BRWD3Q6RI45 1802 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 TUBAL3A6NHL2 446 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 TRIM77I1YAP6 450 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 HYAL3O43820 417 aaPredicted RBP12.43□□□□□ -0.42
RTN4-202ENST00000337526 CTSVO60911 334 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 GRPP07492 148 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 NANPQ8TBE9 248 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 C10orf90Q96M02 699 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 OXGR1Q96P68 337 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 LANCL2Q9NS86 450 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 B3GAT1Q9P2W7 334 aa12.43□□□□□ -0.42
RTN4-202ENST00000337526 IMPA2O14732 288 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 WNT1P04628 370 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 EDDM3BP56851 147 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 SHBQ15464 509 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 CLLU1Q5K131 121 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 TMEM88Q6PEY1 159 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 ZNF808Q8N4W9 903 aaPredicted RBP12.42□□□□□ -0.42
RTN4-202ENST00000337526 MRGPRX4Q96LA9 322 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 CMTM3Q96MX0 182 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 HIPK2Q9H2X6 1198 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 PLEKHA2Q9HB19 425 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 SH3BGRL2Q9UJC5 107 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 GDF2Q9UK05 429 aaPredicted RBP12.42□□□□□ -0.42
RTN4-202ENST00000337526 ICE1Q9Y2F5 2266 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 ZNF732B4DXR9 585 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 KLRC4-KLRK1H3BQV0 150 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 AVPR2P30518 371 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 FBXW5Q969U6 566 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 C2orf50Q96LR7 162 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 FER1L6-AS2Q96M78 137 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 TINAGL1Q9GZM7 467 aaPredicted RBP12.42□□□□□ -0.42
RTN4-202ENST00000337526 C12orf49Q9H741 205 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 SPTY2D1-AS1A0A0U1RR47 76 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 WDR1O75083 606 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 OR2J2O76002 312 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 NDUFB6O95139 128 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 NRASP01111 189 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 RAG2P55895 527 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms