RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 C19orf12Q9NSK7 152 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 TMEM272A0A1B0GTI8 110 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 PQLC2LA1A4F0 135 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 EMDP50402 254 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 CCDC71LQ8N9Z2 235 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 VN1R2Q8NFZ6 395 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 OR56B2PQ8NGI1 322 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 KCNG3Q8TAE7 436 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 RPUSD4Q96CM3 377 aaKnown RBP11.98□□□□□ -0.49
COL2A1-201ENST00000337299 PIK3IP1Q96FE7 263 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 MRPS18AQ9NVS2 196 aaKnown RBP11.98□□□□□ -0.49
COL2A1-201ENST00000337299 PCDHGA1Q9Y5H4 931 aa11.98□□□□□ -0.49
COL2A1-201ENST00000337299 FAM221AA4D161 298 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF727A8MUV8 499 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 H0YGG7 62 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ST8SIA3O43173 380 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ADAM11O75078 769 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 TLE4Q04727 773 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 TMEM128Q5BJH2 165 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 PLXDC2Q6UX71 529 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 LFNGQ8NES3 379 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 STT3BQ8TCJ2 826 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 HIST1H2AAQ96QV6 131 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ESRP2Q9H6T0 727 aaKnown RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 LRIT1Q9P2V4 623 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 SEC14L6B5MCN3 397 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 GALR3O60755 368 aaPredicted RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 THBS1P07996 1170 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 CTHP32929 405 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 WDR38Q5JTN6 314 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ADIPOR2Q86V24 386 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF429Q86V71 674 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ARRDC3Q96B67 414 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 SLC25A38Q96DW6 304 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF2Q9BSG1 426 aaPredicted RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 SLC35B3Q9H1N7 401 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 SFXN1Q9H9B4 322 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 NPDC1Q9NQX5 325 aaPredicted RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ELLP55199 621 aaPredicted RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 TAF9Q16594 264 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 TMEM31Q5JXX7 168 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF66Q6ZN08 573 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 GPR61Q9BZJ8 451 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 WWTR1Q9GZV5 400 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 SLC25A31Q9H0C2 315 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 APOBEC3BQ9UH17 382 aaKnown RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 COL11A2P13942 1736 aaPredicted RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 TP53BP1Q12888 1972 aaPredicted RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 GEMIN2O14893 280 aaKnown RBP11.97□□□□□ -0.49
COL2A1-201ENST00000337299 FGF17O60258 216 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 CST4P01036 141 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 SERPINE2P07093 398 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF728P0DKX0 622 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF266Q14584 549 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 GPR119Q8TDV5 335 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 PIGTQ969N2 578 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 FLVCR1Q9Y5Y0 555 aa11.97□□□□□ -0.49
COL2A1-201ENST00000337299 OR2W5A6NFC9 320 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 C17orf105B2RV13 164 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 RAB27BO00194 218 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 CST7O76096 145 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 ABLIM3O94929 683 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 GLRA1P23415 457 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 NR0B2Q15466 257 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 EXD3Q8N9H8 876 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 ASB13Q8WXK3 278 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 TGM7Q96PF1 710 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 GGACTQ9BVM4 153 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 LANCL2Q9NS86 450 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 TRIP12Q14669 1992 aaPredicted RBP11.96□□□□□ -0.49
COL2A1-201ENST00000337299 GPR137BO60478 399 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 LILRB3O75022 631 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 ACTL6AO96019 429 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 HBE1P02100 147 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 FCGR2AP12318 317 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 ST6GAL1P15907 406 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 SFTPDP35247 375 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 H3F3AP84243 136 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 RPL18Q07020 188 aaKnown RBP11.96□□□□□ -0.49
COL2A1-201ENST00000337299 OR4N2Q8NGD1 307 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 OR51F2Q8NH61 342 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 TMEM234Q8WY98 164 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 CMTM3Q96MX0 182 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 NAA11Q9BSU3 229 aaPredicted RBP11.96□□□□□ -0.49
COL2A1-201ENST00000337299 NRSN2Q9GZP1 204 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 ZNF160Q9HCG1 818 aa11.96□□□□□ -0.49
COL2A1-201ENST00000337299 H3BP45 60 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 METAP1P53582 386 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 SURF2Q15527 256 aaPredicted RBP11.96□□□□□ -0.5
COL2A1-201ENST00000337299 COL13A1Q5TAT6 717 aaPredicted RBP11.96□□□□□ -0.5
COL2A1-201ENST00000337299 NSUN5P2Q63ZY6 315 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 FAM199XQ6PEV8 388 aaPredicted RBP11.96□□□□□ -0.5
COL2A1-201ENST00000337299 TMPRSS11FQ6ZWK6 438 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 BAGE3Q86Y29 109 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 BAGE2Q86Y30 109 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 MISPQ8IVT2 679 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 CCDC54Q8NEL0 328 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 ROBO4Q8WZ75 1007 aa11.96□□□□□ -0.5
COL2A1-201ENST00000337299 FAM210BQ96KR6 192 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms