RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PCDHB10Q9UN67 800 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 TRAV1-2A0A0B4J238 106 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 A0A0U1RQK1 487 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 DHHO43323 396 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 CLDN20P56880 219 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 PCK2Q16822 640 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 CD300LDQ6UXZ3 194 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 TP53TG5Q9Y2B4 290 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 RALGAPA2Q2PPJ7 1873 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 PATE3B3GLJ2 98 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 FCARP24071 287 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 S100A11P31949 105 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 SUMO3P55854 103 aaPredicted RBP11.7□□□□□ -0.54
VSTM4-202ENST00000332853 FZD5Q13467 585 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 PAN3Q58A45 887 aaKnown RBP11.7□□□□□ -0.54
VSTM4-202ENST00000332853 ELFN2Q5R3F8 820 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 DGAT2L6Q6ZPD8 337 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 TMUB2Q71RG4 321 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 OR4D9Q8NGE8 314 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 SGK3Q96BR1 496 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 VSTM2LQ96N03 204 aa11.7□□□□□ -0.54
VSTM4-202ENST00000332853 TEX51A0A1B0GUA7 166 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 M6PRP20645 277 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 ZNF674Q2M3X9 581 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 CEACAM16Q2WEN9 425 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 OR2V1Q8NHB1 315 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 BCO1Q9HAY6 547 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 A0A087WZY1 265 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 ZFPL1O95159 310 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 SPATA46Q5T0L3 261 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 RNLSQ5VYX0 342 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 PDCD11Q14690 1871 aaKnown RBP11.69□□□□□ -0.54
VSTM4-202ENST00000332853 ALG1L2C9J202 215 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 TNFSF14O43557 240 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 OR8G1Q15617 311 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 OR1C1Q15619 314 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 FAM109AQ8N4B1 249 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 OR5B12Q96R08 314 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 C4orf47A7E2U8 309 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 MSTNO14793 375 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 RER1O15258 196 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 DND1Q8IYX4 353 aaKnown RBP11.69□□□□□ -0.54
VSTM4-202ENST00000332853 OR5M9Q8NGP3 310 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 GPA33Q99795 319 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 SLC52A3Q9NQ40 469 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 SSX4O60224 188 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 IL11RAQ14626 422 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 PRSS35Q8N3Z0 413 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 P4HTMQ9NXG6 502 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 ZNF236Q9UL36 1845 aa11.69□□□□□ -0.54
VSTM4-202ENST00000332853 SIRPB1O00241 398 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 PLPP2O43688 288 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 DPPA2Q7Z7J5 298 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 OR4S1Q8NGB4 309 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 OR51H1Q8NH63 302 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 CPNE4Q96A23 557 aaPredicted RBP11.68□□□□□ -0.54
VSTM4-202ENST00000332853 PARP12Q9H0J9 701 aaKnown RBP11.68□□□□□ -0.54
VSTM4-202ENST00000332853 CDC20Q12834 499 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 RDH5Q92781 318 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 KCNJ16Q9NPI9 418 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 GLTPQ9NZD2 209 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 CES1P1Q9UKY3 287 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 AKR7A2O43488 359 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 CCL4P13236 92 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 PTGER4P35408 488 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 RFX2P48378 723 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 SLC25A1P53007 311 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 IL10RAQ13651 578 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 ALKBH6Q3KRA9 238 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 WDR5BQ86VZ2 330 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 DOK1Q99704 481 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 PLSCR3Q9NRY6 295 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 C1QBP02746 253 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 PDCD1Q15116 288 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 PLXDC2Q6UX71 529 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 OR4C16Q8NGL9 310 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 H1FXQ92522 213 aaKnown RBP11.68□□□□□ -0.54
VSTM4-202ENST00000332853 RAB9BQ9NP90 201 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 TAS2R5Q9NYW4 299 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 NPIPB8E9PQR5 432 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 WNT11O96014 354 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 SNRNP70P08621 437 aaKnown RBP11.68□□□□□ -0.54
VSTM4-202ENST00000332853 BTN1A1Q13410 526 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 ZXDCQ2QGD7 858 aaPredicted RBP11.68□□□□□ -0.54
VSTM4-202ENST00000332853 PTPMT1Q8WUK0 201 aaPredicted RBP11.68□□□□□ -0.54
VSTM4-202ENST00000332853 C10orf90Q96M02 699 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 DECR2Q9NUI1 292 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 LUZP4Q9P127 313 aa11.68□□□□□ -0.54
VSTM4-202ENST00000332853 PLPP3O14495 311 aa11.67□□□□□ -0.54
VSTM4-202ENST00000332853 ANGPTL7O43827 346 aa11.67□□□□□ -0.54
VSTM4-202ENST00000332853 EIF2S3P41091 472 aaKnown RBP11.67□□□□□ -0.54
VSTM4-202ENST00000332853 CSRP3P50461 194 aa11.67□□□□□ -0.54
VSTM4-202ENST00000332853 SNRPNP63162 240 aaKnown RBP11.67□□□□□ -0.54
VSTM4-202ENST00000332853 AADACL4Q5VUY2 407 aa11.67□□□□□ -0.54
VSTM4-202ENST00000332853 ZNF529Q6P280 563 aa11.67□□□□□ -0.54
VSTM4-202ENST00000332853 LHFPL2Q6ZUX7 228 aa11.67□□□□□ -0.54
VSTM4-202ENST00000332853 OR51A2Q8NGJ7 313 aa11.67□□□□□ -0.54
VSTM4-202ENST00000332853 KCNK15Q9H427 330 aa11.67□□□□□ -0.54
VSTM4-202ENST00000332853 PCOLCE2Q9UKZ9 415 aa11.67□□□□□ -0.54
VSTM4-202ENST00000332853 BHLHE40O14503 412 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms